XinYue Yan , Yang Li , TianQi Qin , Ying Gan , Na Li
{"title":"The light shifts in ammonia nitrogen affected soil microbial communities with their related dissolved organic matter in the arid region","authors":"XinYue Yan , Yang Li , TianQi Qin , Ying Gan , Na Li","doi":"10.1016/j.ejsobi.2025.103725","DOIUrl":null,"url":null,"abstract":"<div><div>Arid and semi-arid climates are vital components of ecosystem, however, the mechanisms by which microorganisms respond to soil dissolved organic matter (DOM) in these regions under the constraint of ammonium nitrogen remain unknown. In this study, we investigated the differences in microbial diversity, composition, abundance, and DOM composition in soils with varying ammonia-nitrogen (NH<sub>4</sub><sup>+</sup>-N) concentrations in arid and semi-arid regions. We also explored the connectivity between the co-occurrence networks of microorganisms and DOM. In high NH<sub>4</sub><sup>+</sup>-N environments, the phyla of soil microorganisms that showed an increase included Anabaena and Thick-walled Bacteria. Moreover, the abundance of microorganisms such as <em>Reyranella</em>, <em>Actinophyfocala</em>, and <em>Arhrobacter</em> also increased. The main metabolic modes of these microorganisms were lysine biosynthesis and D-amino acid metabolism. Metabolites that exhibited elevated levels along with the increase in NH<sub>4</sub><sup>+</sup>-N content included those related to chlorocyclohexane and chlorobenzene degradation, as well as geraniol degradation. NH<sub>4</sub><sup>+</sup>-N was identified as the most significant environmental factor influencing the relationship between microorganisms and DOM. In high-ammonia environments, the number of links, average clustering coefficient, density, and connectivity of the microorganisms and DOM co-occurrence network were significantly higher. This indicates that the co-occurrence network was more complex and stable. In contrast, low NH<sub>4</sub><sup>+</sup>-N environments restricted microbial metabolic processes and altered the DOM composition, leading to a further limitation of microbial activity. This study elucidated the response mechanism of soil microorganisms to DOM under the limitation of NH<sub>4</sub><sup>+</sup>-N in arid and semi-arid regions and emphasized the crucial role of soil NH<sub>4</sub><sup>+</sup>-N concentration in the soil biological cycle. It offers a reference for monitoring soil quality, preventing soil degradation, and maintaining ecological environment and food security.</div></div>","PeriodicalId":12057,"journal":{"name":"European Journal of Soil Biology","volume":"125 ","pages":"Article 103725"},"PeriodicalIF":3.7000,"publicationDate":"2025-03-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"European Journal of Soil Biology","FirstCategoryId":"97","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1164556325000172","RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ECOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
Arid and semi-arid climates are vital components of ecosystem, however, the mechanisms by which microorganisms respond to soil dissolved organic matter (DOM) in these regions under the constraint of ammonium nitrogen remain unknown. In this study, we investigated the differences in microbial diversity, composition, abundance, and DOM composition in soils with varying ammonia-nitrogen (NH4+-N) concentrations in arid and semi-arid regions. We also explored the connectivity between the co-occurrence networks of microorganisms and DOM. In high NH4+-N environments, the phyla of soil microorganisms that showed an increase included Anabaena and Thick-walled Bacteria. Moreover, the abundance of microorganisms such as Reyranella, Actinophyfocala, and Arhrobacter also increased. The main metabolic modes of these microorganisms were lysine biosynthesis and D-amino acid metabolism. Metabolites that exhibited elevated levels along with the increase in NH4+-N content included those related to chlorocyclohexane and chlorobenzene degradation, as well as geraniol degradation. NH4+-N was identified as the most significant environmental factor influencing the relationship between microorganisms and DOM. In high-ammonia environments, the number of links, average clustering coefficient, density, and connectivity of the microorganisms and DOM co-occurrence network were significantly higher. This indicates that the co-occurrence network was more complex and stable. In contrast, low NH4+-N environments restricted microbial metabolic processes and altered the DOM composition, leading to a further limitation of microbial activity. This study elucidated the response mechanism of soil microorganisms to DOM under the limitation of NH4+-N in arid and semi-arid regions and emphasized the crucial role of soil NH4+-N concentration in the soil biological cycle. It offers a reference for monitoring soil quality, preventing soil degradation, and maintaining ecological environment and food security.
期刊介绍:
The European Journal of Soil Biology covers all aspects of soil biology which deal with microbial and faunal ecology and activity in soils, as well as natural ecosystems or biomes connected to ecological interests: biodiversity, biological conservation, adaptation, impact of global changes on soil biodiversity and ecosystem functioning and effects and fate of pollutants as influenced by soil organisms. Different levels in ecosystem structure are taken into account: individuals, populations, communities and ecosystems themselves. At each level, different disciplinary approaches are welcomed: molecular biology, genetics, ecophysiology, ecology, biogeography and landscape ecology.