Identification of the HO•CHC(O)NH2 Radical Intermediate in the Reaction of H + Glycolamide in Solid Para-Hydrogen and Its Implication to the Interstellar Formation of Higher-Order Amides and Polypeptides
{"title":"Identification of the HO•CHC(O)NH2 Radical Intermediate in the Reaction of H + Glycolamide in Solid Para-Hydrogen and Its Implication to the Interstellar Formation of Higher-Order Amides and Polypeptides","authors":"Prasad Ramesh Joshi*, and , Yuan-Pern Lee*, ","doi":"10.1021/acsearthspacechem.4c0040910.1021/acsearthspacechem.4c00409","DOIUrl":null,"url":null,"abstract":"<p >Glycolamide [HOCH<sub>2</sub>C(O)NH<sub>2</sub>, GAm], the only isomer of glycine [H<sub>2</sub>NCH<sub>2</sub>C(O)OH] detected in the interstellar medium (ISM) to date, consists of an inherent peptide bond [C(O)NH] that is fundamental to protein synthesis and the origin of life. Despite its importance in ISM, detailed investigations on the reactivity of GAm under cosmic circumstances remain rather limited. In the present study, we performed the reaction involving H atoms and GAm in solid <i>para</i>-hydrogen (<i>p</i>-H<sub>2</sub>) at 3.2 K and observed the exclusive formation of 2-amino-1-hydroxy-2-oxoethyl radical [HO<sup>•</sup>CHC(O)NH<sub>2</sub>] via H abstraction on the CH<sub>2</sub> moiety of GAm. We successfully characterized the infrared spectra of both <i>Cis–cis</i> (<i>Cc</i>)- and <i>Trans–trans</i> (<i>Tt</i>)-conformers of HO<sup>•</sup>CHC(O)NH<sub>2</sub> from the reactions of H + <i>Cc</i>-GAm and H + <i>Tt</i>-GAm in a single experiment; the ratio of <i>Cc</i>:<i>Tt</i> conformers of GAm in the deposited matrix was estimated to be ∼3:2, and, after H abstraction, that of HO<sup>•</sup>CHC(O)NH<sub>2</sub> remains approximately the same. In darkness, the increase in the infrared intensities of both conformers of HO<sup>•</sup>CHC(O)NH<sub>2</sub> indicated that these radicals were formed from the reaction H + <i>Cc</i>-/<i>Tt</i>-GAm through tunneling, a possible route in dark interstellar clouds. This radical intermediate, HO<sup>•</sup>CHC(O)NH<sub>2</sub>, may serve as a potential precursor in the formation of higher-order amides bearing a chiral center, including lactamide and glyceramide (glycerol amide), after reactions with <sup>•</sup>CH<sub>3</sub> and <sup>•</sup>CH<sub>2</sub>OH, respectively. In addition to the conventional condensation reaction in the process of polymerization for the formation of dipeptides such as malonamide in the dark regions of the ISM, the radical–radical reaction of HO<sup>•</sup>CHC(O)NH<sub>2</sub> with NH<sub>2</sub><sup>•</sup>CO might serve as an alternative pathway.</p>","PeriodicalId":15,"journal":{"name":"ACS Earth and Space Chemistry","volume":"9 3","pages":"769–781 769–781"},"PeriodicalIF":2.9000,"publicationDate":"2025-03-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://pubs.acs.org/doi/epdf/10.1021/acsearthspacechem.4c00409","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"ACS Earth and Space Chemistry","FirstCategoryId":"92","ListUrlMain":"https://pubs.acs.org/doi/10.1021/acsearthspacechem.4c00409","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0
Abstract
Glycolamide [HOCH2C(O)NH2, GAm], the only isomer of glycine [H2NCH2C(O)OH] detected in the interstellar medium (ISM) to date, consists of an inherent peptide bond [C(O)NH] that is fundamental to protein synthesis and the origin of life. Despite its importance in ISM, detailed investigations on the reactivity of GAm under cosmic circumstances remain rather limited. In the present study, we performed the reaction involving H atoms and GAm in solid para-hydrogen (p-H2) at 3.2 K and observed the exclusive formation of 2-amino-1-hydroxy-2-oxoethyl radical [HO•CHC(O)NH2] via H abstraction on the CH2 moiety of GAm. We successfully characterized the infrared spectra of both Cis–cis (Cc)- and Trans–trans (Tt)-conformers of HO•CHC(O)NH2 from the reactions of H + Cc-GAm and H + Tt-GAm in a single experiment; the ratio of Cc:Tt conformers of GAm in the deposited matrix was estimated to be ∼3:2, and, after H abstraction, that of HO•CHC(O)NH2 remains approximately the same. In darkness, the increase in the infrared intensities of both conformers of HO•CHC(O)NH2 indicated that these radicals were formed from the reaction H + Cc-/Tt-GAm through tunneling, a possible route in dark interstellar clouds. This radical intermediate, HO•CHC(O)NH2, may serve as a potential precursor in the formation of higher-order amides bearing a chiral center, including lactamide and glyceramide (glycerol amide), after reactions with •CH3 and •CH2OH, respectively. In addition to the conventional condensation reaction in the process of polymerization for the formation of dipeptides such as malonamide in the dark regions of the ISM, the radical–radical reaction of HO•CHC(O)NH2 with NH2•CO might serve as an alternative pathway.
期刊介绍:
The scope of ACS Earth and Space Chemistry includes the application of analytical, experimental and theoretical chemistry to investigate research questions relevant to the Earth and Space. The journal encompasses the highly interdisciplinary nature of research in this area, while emphasizing chemistry and chemical research tools as the unifying theme. The journal publishes broadly in the domains of high- and low-temperature geochemistry, atmospheric chemistry, marine chemistry, planetary chemistry, astrochemistry, and analytical geochemistry. ACS Earth and Space Chemistry publishes Articles, Letters, Reviews, and Features to provide flexible formats to readily communicate all aspects of research in these fields.