Shangzhou Li, Ping Dong, Hui Zhang, Xin Xu, Lei Shi, Tong Sun, Hongbo Qiao, Jibo Yue, Wei Guo
{"title":"Integrating ecological niche and epidemiological models to predict wheat fusarium head blight using remote sensing and meteorological data","authors":"Shangzhou Li, Ping Dong, Hui Zhang, Xin Xu, Lei Shi, Tong Sun, Hongbo Qiao, Jibo Yue, Wei Guo","doi":"10.1016/j.compag.2025.110255","DOIUrl":null,"url":null,"abstract":"<div><div>Fusarium head blight (FHB) is a major wheat disease worldwide, significantly affecting yield and quality. Disease risk assessment and spatiotemporal dynamic prediction are crucial for effective FHB management and control. Although ecological niche models (ENMs) and epidemiological models (EMs) have been widely applied to assess the potential distribution of diseases and simulate their progression, studies integrating these models with satellite remote sensing and meteorological data for crop disease prediction remain limited. To fill this gap, our study developed an integrated prediction framework based on susceptible-exposed-infected (SEI) model. First, remote sensing data extracted host factors, including wheat spatial distribution, key phenological (KPh) stages defined by Day of Year (DOY), and early physiological changes. This information, along with meteorological features, topographic factors, and sampling coordinates, was utilized to construct an ENM based on Maximum Entropy (MaxEnt) algorithm. MaxEnt evaluation results guided input adjustments, ensuring high AUC output to characterize initial infection levels for SEI model. Next, transition rates in SEI model were determined by the coupling of the parameterized response functions of daily temperature, relative humidity, and DOY for KPh stages to mechanize the EM. The mechanistic model (MM), with optimal parameter values derived from sensitivity analysis and optimization, provided a robust prediction of disease occurrence on the sampling day and enabled spatiotemporal dynamic simulation of wheat FHB. The final MM achieved a coefficient of determination of 0.83, mean absolute error of 0.06, root mean square error of 0.072, and classification F1-score of 0.88. The simulated disease progression curve was consistent with the epidemiological characteristics of FHB, exhibiting an S-shaped pattern. These results suggest that integrating remote sensing and meteorological data with MaxEnt and SEI models for FHB prediction holds significant application potential.</div></div>","PeriodicalId":50627,"journal":{"name":"Computers and Electronics in Agriculture","volume":"234 ","pages":"Article 110255"},"PeriodicalIF":7.7000,"publicationDate":"2025-03-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computers and Electronics in Agriculture","FirstCategoryId":"97","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0168169925003618","RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"AGRICULTURE, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0
Abstract
Fusarium head blight (FHB) is a major wheat disease worldwide, significantly affecting yield and quality. Disease risk assessment and spatiotemporal dynamic prediction are crucial for effective FHB management and control. Although ecological niche models (ENMs) and epidemiological models (EMs) have been widely applied to assess the potential distribution of diseases and simulate their progression, studies integrating these models with satellite remote sensing and meteorological data for crop disease prediction remain limited. To fill this gap, our study developed an integrated prediction framework based on susceptible-exposed-infected (SEI) model. First, remote sensing data extracted host factors, including wheat spatial distribution, key phenological (KPh) stages defined by Day of Year (DOY), and early physiological changes. This information, along with meteorological features, topographic factors, and sampling coordinates, was utilized to construct an ENM based on Maximum Entropy (MaxEnt) algorithm. MaxEnt evaluation results guided input adjustments, ensuring high AUC output to characterize initial infection levels for SEI model. Next, transition rates in SEI model were determined by the coupling of the parameterized response functions of daily temperature, relative humidity, and DOY for KPh stages to mechanize the EM. The mechanistic model (MM), with optimal parameter values derived from sensitivity analysis and optimization, provided a robust prediction of disease occurrence on the sampling day and enabled spatiotemporal dynamic simulation of wheat FHB. The final MM achieved a coefficient of determination of 0.83, mean absolute error of 0.06, root mean square error of 0.072, and classification F1-score of 0.88. The simulated disease progression curve was consistent with the epidemiological characteristics of FHB, exhibiting an S-shaped pattern. These results suggest that integrating remote sensing and meteorological data with MaxEnt and SEI models for FHB prediction holds significant application potential.
期刊介绍:
Computers and Electronics in Agriculture provides international coverage of advancements in computer hardware, software, electronic instrumentation, and control systems applied to agricultural challenges. Encompassing agronomy, horticulture, forestry, aquaculture, and animal farming, the journal publishes original papers, reviews, and applications notes. It explores the use of computers and electronics in plant or animal agricultural production, covering topics like agricultural soils, water, pests, controlled environments, and waste. The scope extends to on-farm post-harvest operations and relevant technologies, including artificial intelligence, sensors, machine vision, robotics, networking, and simulation modeling. Its companion journal, Smart Agricultural Technology, continues the focus on smart applications in production agriculture.