Development of MitoWizz: a Bioinformatics Solution for Mitochondrial DNA Analysis in Both Forensic and Clinical Applications.

Q2 Medicine
Nejira Handzic, Dino Pecar, Selma Durgut, Lana Salihefendic, Rijad Konjhodzic
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Abstract

Background: MitoWizz is an advanced bioinformatics tool designed for the analysis of the human mitochondrial genome, offering precise and efficient data interpretation. It enables comparisons of sequencing results obtained from various instrumental methods with the reference Andersen genome (rCRS), aiding in the identification of alterations. This capability is particularly valuable in forensic and clinical mitochondrial DNA analysis.

Objective: The primary goal of developing MitoWizz is to automate and streamline mitochondrial DNA analysis, providing researchers and forensic experts with a fast, reliable, and comprehensive tool for sequence comparison, variation detection, and data validation.

Methods: MitoWizz compares query sequences in opposed to the reference genome and allows direct comparison of two sequences to identify genetic variations. To ensure accuracy, the results are validated through the Clustal Omega W by aligning sequences with the human mitochondrial DNA reference from GenBank (NC_012920.1).

Results: The software detected genetic variations and generated a visual report, as demonstrated in an analysis where 11 mutations were identified in various genes, with an 88% sequence identity to the reference genome. The accuracy of the detected alterations was further validated using the Omega Clustal W program.

Conslusion: MitoWizz significantly reduces analysis time and enhances result reliability by integrating multiple analytical steps into a single platform. By automating mtDNA comparisons and validation, it provides forensic and research laboratories with a high-throughput, efficient solution for precise mitochondrial genome analysis.

背景介绍MitoWizz 是一种先进的生物信息学工具,专为分析人类线粒体基因组而设计,提供精确高效的数据解读。它能将各种仪器方法获得的测序结果与参考安徒生基因组(rCRS)进行比较,从而帮助识别改变。这一功能在法医和临床线粒体 DNA 分析中尤为重要:开发 MitoWizz 的主要目的是自动化和简化线粒体 DNA 分析,为研究人员和法医专家提供快速、可靠和全面的序列比较、变异检测和数据验证工具:方法:MitoWizz 将查询序列与参考基因组进行对比,并允许直接对比两个序列以识别基因变异。为确保准确性,结果通过 Clustal Omega W 与 GenBank(NC_012920.1)中的人类线粒体 DNA 参考序列进行比对验证:该软件能检测基因变异并生成可视化报告,在一项分析中发现了不同基因中的 11 个变异,与参考基因组的序列同一性为 88%。使用 Omega Clustal W 程序进一步验证了检测到的变异的准确性:MitoWizz将多个分析步骤整合到一个平台中,大大缩短了分析时间,提高了结果的可靠性。通过自动进行 mtDNA 比对和验证,它为法医和研究实验室提供了高通量、高效的线粒体基因组精确分析解决方案。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Acta Informatica Medica
Acta Informatica Medica Medicine-Medicine (all)
CiteScore
2.90
自引率
0.00%
发文量
37
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