SAM-MedUS: a foundational model for universal ultrasound image segmentation.

IF 1.7 Q3 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING
Journal of Medical Imaging Pub Date : 2025-03-01 Epub Date: 2025-02-27 DOI:10.1117/1.JMI.12.2.027001
Feng Tian, Jintao Zhai, Jinru Gong, Weirui Lei, Shuai Chang, Fangfang Ju, Shengyou Qian, Xiao Zou
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引用次数: 0

Abstract

Purpose: Segmentation of ultrasound images for medical diagnosis, monitoring, and research is crucial, and although existing methods perform well, they are limited by specific organs, tumors, and image devices. Applications of the Segment Anything Model (SAM), such as SAM-med2d, use a large number of medical datasets that contain only a small fraction of the ultrasound medical images.

Approach: In this work, we proposed a SAM-MedUS model for generic ultrasound image segmentation that utilizes the latest publicly available ultrasound image dataset to create a diverse dataset containing eight site categories for training and testing. We integrated ConvNext V2 and CM blocks in the encoder for better global context extraction. In addition, a boundary loss function is used to improve the segmentation of fuzzy boundaries and low-contrast ultrasound images.

Results: Experimental results show that SAM-MedUS outperforms recent methods on multiple ultrasound datasets. For the more easily datasets such as the adult kidney, it achieves 87.93% IoU and 93.58% dice, whereas for more complex ones such as the infant vein, IoU and dice reach 62.31% and 78.93%, respectively.

Conclusions: We collected and collated an ultrasound dataset of multiple different site types to achieve uniform segmentation of ultrasound images. In addition, the use of additional auxiliary branches ConvNext V2 and CM block enhances the ability of the model to extract global information and the use of boundary loss allows the model to exhibit robust performance and excellent generalization ability.

SAM-MedUS:通用超声图像分割的基础模型。
目的:超声图像分割用于医学诊断、监测和研究是至关重要的,尽管现有的方法表现良好,但它们受到特定器官、肿瘤和图像设备的限制。分段任意模型(SAM)的应用,如SAM-med2d,使用了大量的医学数据集,而这些数据集只包含一小部分超声医学图像。方法:在这项工作中,我们提出了一种用于通用超声图像分割的SAM-MedUS模型,该模型利用最新的公开超声图像数据集来创建包含八个站点类别的多样化数据集,用于训练和测试。我们在编码器中集成了ConvNext V2和CM块,以便更好地提取全局上下文。此外,采用边界损失函数对模糊边界和低对比度超声图像进行分割。结果:实验结果表明,SAM-MedUS在多种超声数据集上优于现有方法。对于较为简单的数据集,如成人肾脏,IoU达到87.93%,dice达到93.58%,而对于较为复杂的数据集,如婴儿静脉,IoU和dice分别达到62.31%和78.93%。结论:我们收集和整理了多个不同部位类型的超声数据集,实现了超声图像的均匀分割。此外,使用额外的辅助分支ConvNext V2和CM块增强了模型提取全局信息的能力,使用边界损失使模型表现出鲁棒性和出色的泛化能力。
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来源期刊
Journal of Medical Imaging
Journal of Medical Imaging RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING-
CiteScore
4.10
自引率
4.20%
发文量
0
期刊介绍: JMI covers fundamental and translational research, as well as applications, focused on medical imaging, which continue to yield physical and biomedical advancements in the early detection, diagnostics, and therapy of disease as well as in the understanding of normal. The scope of JMI includes: Imaging physics, Tomographic reconstruction algorithms (such as those in CT and MRI), Image processing and deep learning, Computer-aided diagnosis and quantitative image analysis, Visualization and modeling, Picture archiving and communications systems (PACS), Image perception and observer performance, Technology assessment, Ultrasonic imaging, Image-guided procedures, Digital pathology, Biomedical applications of biomedical imaging. JMI allows for the peer-reviewed communication and archiving of scientific developments, translational and clinical applications, reviews, and recommendations for the field.
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