Photophysics of 5,6,7,8-tetrahydrobiopterin on a femtosecond time-scale

IF 3.9 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Varvara G. Kubenko, Vladimir A. Pomogaev, Andrey A. Buglak, Alexei I. Kononov
{"title":"Photophysics of 5,6,7,8-tetrahydrobiopterin on a femtosecond time-scale","authors":"Varvara G. Kubenko,&nbsp;Vladimir A. Pomogaev,&nbsp;Andrey A. Buglak,&nbsp;Alexei I. Kononov","doi":"10.1016/j.jphotobiol.2025.113134","DOIUrl":null,"url":null,"abstract":"<div><div>Pterins are naturally occurring compounds widespread in living organisms. 5,6,7,8-Tetrahydrobiopterin (H<sub>4</sub>Bip) is a cofactor of several key enzymes, including NO-synthases and phenylalanine hydroxylase, whereas tetrahydrocyanopterin is a photoreceptor molecule in cyanobacteria. In this regard, tetrahydropterins (H<sub>4</sub>pterins) photochemistry and photophysics have been attracting our attention. H<sub>4</sub>pterins photodegrade in presence of molecular oxygen yielding dihydropterins (H<sub>2</sub>pterins) and oxidized pterins. Meanwhile, the excited states dynamics of H<sub>4</sub>pterins on a femto- and picosecond time-scale remains unclear. To shed light on this area, we perform time-resolved spectroscopy of H<sub>4</sub>Bip using fluorescence up-conversion as well as transient absorption spectroscopy techniques along with TD-DFT non-adiabatic molecular dynamics. We show that the lowest H<sub>4</sub>Bip exited state has a lifetime of ca. 200 fs. Using the BHandHLYP functional and multireference spin-flip (MRSF) method we demonstrate that starting from the S<sub>4</sub> state, H<sub>4</sub>Bip passes to the S<sub>1</sub> state within 50 fs, and after 200 fs a conical intersection with the ground S<sub>0</sub> state is achieved. As a whole, the excited state behavior of H<sub>4</sub>Bip is similar to DNA nucleobases, in particular guanine. These findings allow us to make some speculations about the biochemical role of H<sub>4</sub>pterins photophysics.</div></div>","PeriodicalId":16772,"journal":{"name":"Journal of photochemistry and photobiology. B, Biology","volume":"265 ","pages":"Article 113134"},"PeriodicalIF":3.9000,"publicationDate":"2025-02-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of photochemistry and photobiology. B, Biology","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1011134425000375","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Pterins are naturally occurring compounds widespread in living organisms. 5,6,7,8-Tetrahydrobiopterin (H4Bip) is a cofactor of several key enzymes, including NO-synthases and phenylalanine hydroxylase, whereas tetrahydrocyanopterin is a photoreceptor molecule in cyanobacteria. In this regard, tetrahydropterins (H4pterins) photochemistry and photophysics have been attracting our attention. H4pterins photodegrade in presence of molecular oxygen yielding dihydropterins (H2pterins) and oxidized pterins. Meanwhile, the excited states dynamics of H4pterins on a femto- and picosecond time-scale remains unclear. To shed light on this area, we perform time-resolved spectroscopy of H4Bip using fluorescence up-conversion as well as transient absorption spectroscopy techniques along with TD-DFT non-adiabatic molecular dynamics. We show that the lowest H4Bip exited state has a lifetime of ca. 200 fs. Using the BHandHLYP functional and multireference spin-flip (MRSF) method we demonstrate that starting from the S4 state, H4Bip passes to the S1 state within 50 fs, and after 200 fs a conical intersection with the ground S0 state is achieved. As a whole, the excited state behavior of H4Bip is similar to DNA nucleobases, in particular guanine. These findings allow us to make some speculations about the biochemical role of H4pterins photophysics.

Abstract Image

蝶呤是广泛存在于生物体内的天然化合物。5,6,7,8-四氢生物蝶呤(H4Bip)是包括氮氧化物合成酶和苯丙氨酸羟化酶在内的几种关键酶的辅助因子,而四氢氰蝶呤则是蓝藻中的感光分子。在这方面,四氢蝶呤(H4pterins)的光化学和光物理学一直备受关注。H4pterins 在分子氧存在下会发生光降解,生成二氢蝶呤(H2pterins)和氧化蝶呤。同时,H4pterins 在飞秒和皮秒时间尺度上的激发态动力学仍不清楚。为了阐明这一领域,我们利用荧光上转换和瞬态吸收光谱技术以及 TD-DFT 非绝热分子动力学,对 H4Bip 进行了时间分辨光谱分析。我们的研究表明,H4Bip 的最低出射态的寿命约为 200 fs。利用 BHandHLYP 函数和多参考自旋翻转(MRSF)方法,我们证明了从 S4 态开始,H4Bip 在 50 fs 内进入 S1 态,200 fs 后与地面 S0 态形成锥形交叉。总的来说,H4Bip 的激发态行为与 DNA 核碱基相似,尤其是鸟嘌呤。这些发现使我们能够对 H4pterins 光物理的生化作用做出一些推测。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
CiteScore
12.10
自引率
1.90%
发文量
161
审稿时长
37 days
期刊介绍: The Journal of Photochemistry and Photobiology B: Biology provides a forum for the publication of papers relating to the various aspects of photobiology, as well as a means for communication in this multidisciplinary field. The scope includes: - Bioluminescence - Chronobiology - DNA repair - Environmental photobiology - Nanotechnology in photobiology - Photocarcinogenesis - Photochemistry of biomolecules - Photodynamic therapy - Photomedicine - Photomorphogenesis - Photomovement - Photoreception - Photosensitization - Photosynthesis - Phototechnology - Spectroscopy of biological systems - UV and visible radiation effects and vision.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信