A recursive embedding and clustering technique for unraveling asymptomatic kidney disease using laboratory data and machine learning.

IF 3.8 2区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES
Eman Alqaissi, Abdulmohsen Algarni, Mohammed Alshehri, Husain Alkhaldy, Afnan Alshehri
{"title":"A recursive embedding and clustering technique for unraveling asymptomatic kidney disease using laboratory data and machine learning.","authors":"Eman Alqaissi, Abdulmohsen Algarni, Mohammed Alshehri, Husain Alkhaldy, Afnan Alshehri","doi":"10.1038/s41598-025-89499-8","DOIUrl":null,"url":null,"abstract":"<p><p>Traditional methods for diagnosing chronic kidney disease (CKD) via laboratory data may not be capable of identifying early kidney disease. Kidney biopsy is unsuitable for regular screening, and imaging tests are costly and time-consuming. Several studies have implemented artificial intelligence (AI) to detect CKD. However, these studies used small datasets, had overfitting problems, lacked generalizability, or used complex algorithms that may require additional computational resources. In this study, we collected and analyzed center-based data and used a recursive embedding and clustering technique to reduce their dimensionality. We identified three clusters from 1600 records. We focused on the second cluster, as most of the characteristics had values in the normal ranges. Normal range values for most indicators generally represent stable kidney function with minor signs of strain, which often remain asymptomatic. Creatinine and eGFR levels within the threshold ranges indicate early kidney stress without filtration issues, which require close monitoring. The gradient-boosting algorithm showed superior performance among all algorithms in detecting these clusters. We evaluated an additional 400 unlabeled records to validate our method. This research can help clinicians automatically detect initial signs in numerous patients via routine tests to prevent the consequences of late-stage CKD detection.</p>","PeriodicalId":21811,"journal":{"name":"Scientific Reports","volume":"15 1","pages":"5820"},"PeriodicalIF":3.8000,"publicationDate":"2025-02-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11832896/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Scientific Reports","FirstCategoryId":"103","ListUrlMain":"https://doi.org/10.1038/s41598-025-89499-8","RegionNum":2,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"MULTIDISCIPLINARY SCIENCES","Score":null,"Total":0}
引用次数: 0

Abstract

Traditional methods for diagnosing chronic kidney disease (CKD) via laboratory data may not be capable of identifying early kidney disease. Kidney biopsy is unsuitable for regular screening, and imaging tests are costly and time-consuming. Several studies have implemented artificial intelligence (AI) to detect CKD. However, these studies used small datasets, had overfitting problems, lacked generalizability, or used complex algorithms that may require additional computational resources. In this study, we collected and analyzed center-based data and used a recursive embedding and clustering technique to reduce their dimensionality. We identified three clusters from 1600 records. We focused on the second cluster, as most of the characteristics had values in the normal ranges. Normal range values for most indicators generally represent stable kidney function with minor signs of strain, which often remain asymptomatic. Creatinine and eGFR levels within the threshold ranges indicate early kidney stress without filtration issues, which require close monitoring. The gradient-boosting algorithm showed superior performance among all algorithms in detecting these clusters. We evaluated an additional 400 unlabeled records to validate our method. This research can help clinicians automatically detect initial signs in numerous patients via routine tests to prevent the consequences of late-stage CKD detection.

求助全文
约1分钟内获得全文 求助全文
来源期刊
Scientific Reports
Scientific Reports Natural Science Disciplines-
CiteScore
7.50
自引率
4.30%
发文量
19567
审稿时长
3.9 months
期刊介绍: We publish original research from all areas of the natural sciences, psychology, medicine and engineering. You can learn more about what we publish by browsing our specific scientific subject areas below or explore Scientific Reports by browsing all articles and collections. Scientific Reports has a 2-year impact factor: 4.380 (2021), and is the 6th most-cited journal in the world, with more than 540,000 citations in 2020 (Clarivate Analytics, 2021). •Engineering Engineering covers all aspects of engineering, technology, and applied science. It plays a crucial role in the development of technologies to address some of the world''s biggest challenges, helping to save lives and improve the way we live. •Physical sciences Physical sciences are those academic disciplines that aim to uncover the underlying laws of nature — often written in the language of mathematics. It is a collective term for areas of study including astronomy, chemistry, materials science and physics. •Earth and environmental sciences Earth and environmental sciences cover all aspects of Earth and planetary science and broadly encompass solid Earth processes, surface and atmospheric dynamics, Earth system history, climate and climate change, marine and freshwater systems, and ecology. It also considers the interactions between humans and these systems. •Biological sciences Biological sciences encompass all the divisions of natural sciences examining various aspects of vital processes. The concept includes anatomy, physiology, cell biology, biochemistry and biophysics, and covers all organisms from microorganisms, animals to plants. •Health sciences The health sciences study health, disease and healthcare. This field of study aims to develop knowledge, interventions and technology for use in healthcare to improve the treatment of patients.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信