A “light in the darkness”: First transcriptomic data from deep-sea spiny eels (Notacanthus, Notacanthiformes)

IF 1.3 4区生物学 Q4 GENETICS & HEREDITY

Marine genomics Pub Date : 2025-02-18 DOI:10.1016/j.margen.2025.101182

André Gomes-dos-Santos , André M. Machado , Francisco Baldó , Juan Carlos Arronte , L. Filipe C. Castro , David Barros-García

引用次数: 0

Abstract

The genus Notacanthus comprises worldwide distributed bathypelagic deep-sea fish species. Despite several interesting ecological traits and their interesting phylogenetic position as relatives of eels, no transcriptomic, genomic, or proteomic resources are currently available. Here, we present a brain and eye transcriptome for two different notacanthid species: the shortfin spiny eel Notacanthus bonaparte (Risso, 1840) and N. arrontei (Bañón et al., 2024). Functional annotation of the transcripts is also provided. These novel datasets will be valuable for future studies on notacanthid fish and the deep-sea bathypelagic fish community.

查看原文本刊更多论文

求助全文

约1分钟内获得全文求助全文

来源期刊

Marine genomics 生物-遗传学

CiteScore

3.60

自引率

5.30%

发文量

审稿时长

29 days

期刊介绍： The journal publishes papers on all functional and evolutionary aspects of genes, chromatin, chromosomes and (meta)genomes of marine (and freshwater) organisms. It deals with new genome-enabled insights into the broader framework of environmental science. Topics within the scope of this journal include: • Population genomics and ecology • Evolutionary and developmental genomics • Comparative genomics • Metagenomics • Environmental genomics • Systems biology More specific topics include: geographic and phylogenomic characterization of aquatic organisms, metabolic capacities and pathways of organisms and communities, biogeochemical cycles, genomics and integrative approaches applied to microbial ecology including (meta)transcriptomics and (meta)proteomics, tracking of infectious diseases, environmental stress, global climate change and ecosystem modelling.