Insight of Metal Ions in Enzymatic Synthesis of Levan: The Metal-Binding Loop.

IF 2.5 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Hyunjun Ko, Minsik Kang, Bong Hyun Sung, Mi-Jin Kim, Jung-Hoon Sohn, Jung-Hoon Bae
{"title":"Insight of Metal Ions in Enzymatic Synthesis of Levan: The Metal-Binding Loop.","authors":"Hyunjun Ko, Minsik Kang, Bong Hyun Sung, Mi-Jin Kim, Jung-Hoon Sohn, Jung-Hoon Bae","doi":"10.4014/jmb.2411.11030","DOIUrl":null,"url":null,"abstract":"<p><p>Levan is a fructose polymer with unique physicochemical properties and physiological activities, making it useful in various industries. It is biologically synthesized from sucrose by the enzyme levansucrase, which does not require metal ions for its fructosylation activity. However, during the molecular characterization of a <i>Pseudomonas chlororaphis</i> levansucrase (PcLscA), it was observed that several divalent metal ions stimulate fructosylation activity by over 2.5-fold. To understand the structural basis of this action, a 3D model of PcLscA was constructed using the artificial intelligence-based modeling software (RoseTTAFold). This analysis revealed a novel metal-binding loop motif. Interestingly, this newly identified loop motif was also found in six known fructansucrase crystal structures. Furthermore, metal-stimulated levan synthesis was confirmed in the other two levansucrases. By identifying this loop motif, this study suggests an efficient approach for the enzymatic synthesis of levan, which traditionally is not known to require metal ions as activators.</p>","PeriodicalId":16481,"journal":{"name":"Journal of microbiology and biotechnology","volume":"35 ","pages":"e2411030"},"PeriodicalIF":2.5000,"publicationDate":"2025-02-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11876013/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of microbiology and biotechnology","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.4014/jmb.2411.11030","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Levan is a fructose polymer with unique physicochemical properties and physiological activities, making it useful in various industries. It is biologically synthesized from sucrose by the enzyme levansucrase, which does not require metal ions for its fructosylation activity. However, during the molecular characterization of a Pseudomonas chlororaphis levansucrase (PcLscA), it was observed that several divalent metal ions stimulate fructosylation activity by over 2.5-fold. To understand the structural basis of this action, a 3D model of PcLscA was constructed using the artificial intelligence-based modeling software (RoseTTAFold). This analysis revealed a novel metal-binding loop motif. Interestingly, this newly identified loop motif was also found in six known fructansucrase crystal structures. Furthermore, metal-stimulated levan synthesis was confirmed in the other two levansucrases. By identifying this loop motif, this study suggests an efficient approach for the enzymatic synthesis of levan, which traditionally is not known to require metal ions as activators.

金属离子在酶促Levan合成中的洞察:金属结合环。
Levan是一种果糖聚合物,具有独特的物理化学性质和生理活性,可用于各种工业。它是由蔗糖通过左旋蔗糖酶生物合成的,它的果糖基化活性不需要金属离子。然而,在对一种绿假单胞菌左万蔗糖酶(PcLscA)的分子表征过程中,观察到几种二价金属离子刺激果糖基化活性超过2.5倍。为了了解这一作用的结构基础,使用基于人工智能的建模软件(RoseTTAFold)构建了PcLscA的三维模型。这一分析揭示了一个新的金属结合环基序。有趣的是,这个新发现的环基序也在六个已知的果糖蔗糖酶晶体结构中被发现。此外,在其他两种左旋蔗糖酶中也证实了金属刺激的左旋蔗糖合成。通过识别这个环基序,本研究提出了一种有效的酶法合成利凡的方法,传统上不知道需要金属离子作为活化剂。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Journal of microbiology and biotechnology
Journal of microbiology and biotechnology BIOTECHNOLOGY & APPLIED MICROBIOLOGY-MICROBIOLOGY
CiteScore
5.50
自引率
3.60%
发文量
151
审稿时长
2 months
期刊介绍: The Journal of Microbiology and Biotechnology (JMB) is a monthly international journal devoted to the advancement and dissemination of scientific knowledge pertaining to microbiology, biotechnology, and related academic disciplines. It covers various scientific and technological aspects of Molecular and Cellular Microbiology, Environmental Microbiology and Biotechnology, Food Biotechnology, and Biotechnology and Bioengineering (subcategories are listed below). Launched in March 1991, the JMB is published by the Korean Society for Microbiology and Biotechnology (KMB) and distributed worldwide.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信