FrAMBI: A Software Framework for Auditory Modeling Based on Bayesian Inference.

IF 2.7 4区 医学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
Roberto Barumerli, Piotr Majdak
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引用次数: 0

Abstract

Research in hearing science often relies on auditory models to describe listener's behaviour and its neural underpinning in acoustic environments. These models gather empirical evidence from behavioural data to address research questions on the neural mechanisms underlying sound perception. Despite seemingly similar statistical methods, auditory models are often implemented for each study separately, which hinders reproducibility and across-study comparisons, thus limiting the advancement at a field level. Here, we introduce a framework for studying neural mechanisms of sound perception by employing auditory modeling based on Bayesian inference (FrAMBI), a MATLAB/Octave toolbox. FrAMBI provides a standardized structure to implement an auditory model following the perception-action cycle and enables the automatic application of statistical analysis with behavioural data. We show FrAMBI's capabilities in several examples with increasing levels of complexity within the context of sound source localisation tasks: a basic implementation for a static scenario, iterating over the perception-action cycle with a moving sound source, the definition of multiple model variants testing different neural mechanisms, and the procedure for parameter estimation and model comparison. Being integrated into the widely used auditory modelling toolbox (AMT), FrAMBI is planned to be maintained in the long term and expanded accordingly, fostering reproducible research in the field of neuroscience.

基于贝叶斯推理的听觉建模软件框架FrAMBI。
听觉科学的研究往往依赖于听觉模型来描述听者的行为及其在声学环境中的神经基础。这些模型从行为数据中收集经验证据,以解决声音感知背后的神经机制的研究问题。尽管统计方法看似相似,但听觉模型往往是单独对每项研究实施的,这阻碍了可重复性和跨研究比较,从而限制了在领域水平上的进步。在这里,我们介绍了一个框架,通过基于贝叶斯推理的听觉建模来研究声音感知的神经机制(FrAMBI),一个MATLAB/Octave工具箱。FrAMBI提供了一个标准化的结构来实现一个遵循感知-行动周期的听觉模型,并能够自动应用行为数据的统计分析。在声源定位任务的背景下,我们在几个例子中展示了FrAMBI的能力,这些例子的复杂性不断增加:静态场景的基本实现,在移动声源的感知-动作循环中迭代,测试不同神经机制的多个模型变体的定义,以及参数估计和模型比较的过程。作为广泛使用的听觉建模工具箱(AMT)的一部分,FrAMBI计划长期维持并相应扩展,以促进神经科学领域的可重复性研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Neuroinformatics
Neuroinformatics 医学-计算机:跨学科应用
CiteScore
6.00
自引率
6.70%
发文量
54
审稿时长
3 months
期刊介绍: Neuroinformatics publishes original articles and reviews with an emphasis on data structure and software tools related to analysis, modeling, integration, and sharing in all areas of neuroscience research. The editors particularly invite contributions on: (1) Theory and methodology, including discussions on ontologies, modeling approaches, database design, and meta-analyses; (2) Descriptions of developed databases and software tools, and of the methods for their distribution; (3) Relevant experimental results, such as reports accompanie by the release of massive data sets; (4) Computational simulations of models integrating and organizing complex data; and (5) Neuroengineering approaches, including hardware, robotics, and information theory studies.
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