A national outbreak of Serratia marcescens complex: investigation reveals genomic population structure but no source, Norway, June 2021 to February 2023.

IF 9.9 2区 医学 Q1 INFECTIOUS DISEASES
Arne Michael Taxt, Vegard Eldholm, Nicola Isabelle Kols, Maria Schei Haugan, Niclas Raffelsberger, Anne Mette Asfeldt, André Ingebretsen, Anita Blomfeldt, Kristin Stenhaug Kilhus, Paul Christoffer Lindemann, Horst Bentele, Jeanette Stålcrantz, Liz Ertzeid Ødeskaug, Thale Cathrine Berg
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引用次数: 0

Abstract

We report a national outbreak of Serratia marcescens complex type 755 (ct755) in Norway, with 74 cases identified between June 2021 and February 2023. Careful reviews of patient journals and interviews were performed, involving 33 hospitals throughout Norway. All available clinical isolates of S. marcescens collected between January 2021 and February 2023 (n = 455, including cases) from all involved hospitals were whole genome sequenced. Cases displayed a pattern of opportunistic infections, as usually observed with S. marcescens. No epidemiological links, common exposures or common risk factors were identified. The investigation pointed to an outbreak source present in the community. We suspect a nationally distributed product, possibly a food product, as the source. Phylogenetic analysis revealed a highly diverse bacterial population containing multiple distinct clusters. The outbreak cluster ct755 stands out as the largest and least diverse clone of a continuum, however a second cluster (ct281) also triggered a separate outbreak investigation. This report highlights challenges in the investigation of outbreaks caused by opportunistic pathogens and suggests that the presence of identical strains of S. marcescens in clinical samples is more common than previously recognised.

粘质沙雷氏菌全国暴发:调查揭示了基因组种群结构,但没有来源,挪威,2021年6月至2023年2月。
我们报告了挪威755型粘质沙雷氏菌(ct755)的全国性暴发,在2021年6月至2023年2月期间发现了74例病例。对患者日记和访谈进行了仔细审查,涉及挪威各地的33家医院。对2021年1月至2023年2月期间从所有相关医院收集的所有可获得的粘质葡萄球菌临床分离株(n = 455,包括病例)进行全基因组测序。病例显示机会性感染的模式,通常与粘质葡萄球菌观察。没有发现流行病学联系、共同暴露或共同危险因素。调查指出,疫情源存在于社区中。我们怀疑是一种全国分销的产品,可能是一种食品。系统发育分析显示一个高度多样化的细菌群体包含多个不同的集群。爆发集群ct755是连续体中最大和最不多样化的克隆,但第二个集群(ct281)也引发了单独的爆发调查。该报告强调了在调查由机会致病菌引起的疫情方面面临的挑战,并表明在临床样本中存在相同的粘质葡萄球菌菌株比以前认识到的更为常见。
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来源期刊
Eurosurveillance
Eurosurveillance INFECTIOUS DISEASES-
CiteScore
32.70
自引率
2.10%
发文量
430
审稿时长
3-8 weeks
期刊介绍: Eurosurveillance is a European peer-reviewed journal focusing on the epidemiology, surveillance, prevention, and control of communicable diseases relevant to Europe.It is a weekly online journal, with 50 issues per year published on Thursdays. The journal includes short rapid communications, in-depth research articles, surveillance reports, reviews, and perspective papers. It excels in timely publication of authoritative papers on ongoing outbreaks or other public health events. Under special circumstances when current events need to be urgently communicated to readers for rapid public health action, e-alerts can be released outside of the regular publishing schedule. Additionally, topical compilations and special issues may be provided in PDF format.
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