Deciphering the Genetic and Epidemiological Landscape of Inherited Retinal Diseases (IRDs) in a Cohort of Eastern Iranian Patients

IF 2.9 3区 医学 Q2 GENETICS & HEREDITY
Reza Mousavi Ardehaie, Atieh Eslahi, Masoome Alerasool, Elham Khani Rad, Nasser Shoeibi, Mohammad Reza Sedaghat, Amir Avan, Alireza Pasdar, Majid Mojarrad
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引用次数: 0

Abstract

Inherited retinal diseases (IRDs) may have significant diagnostic challenges due to their genetic complexity and diverse inheritance patterns. Advanced genotyping tools like exome sequencing (ES) offer promising opportunities for identifying causative variants and improving disease management. This retrospective study was aimed to present prevalent pathogenic and novel variants in patients diagnosed with IRDs using ES. We investigated 154 patients diagnosed clinically with IRDs, of which non-syndromic IRDs were more prevalent than syndromic form (~56% vs. ~44%). Out of 154 unrelated patients, 133 (~86%) were genetically resolved, where retinitis pigmentosa was the most common subtype (26% of all resolved patients). Fifty-three previously known and also 56 novel variants across known IRD genes were identified. Autosomal recessive inheritance predominated in both resolved forms (112/133, 84.21%), with 46 novel variants. This could be due to high rate of consanguinity in the studied families (114/133 patients, 85.71%). The two previously reported ancestral founder pathogenic variants in TMEM67 (c.725A > G) and BBS2 (c.471G > A) genes, as well as the most common variant in AIPL1 gene (c.834G > A), were also prevalent in our patients. Interestingly, identical novel compound heterozygote of the CEP290 gene (c.3167C > A and c.7024C > T) were identified in two unrelated cases. This retrospective study was the first attempt in terms of sample size and diversity to add more to our current knowledge of the genetic makeup of IRDs in a population from the East of Iran. Our findings can facilitate genetic counselling and subtype classification of IRDs, especially in challenging cases.

解读伊朗东部患者队列中遗传性视网膜疾病(IRDs)的遗传和流行病学景观
遗传性视网膜疾病(IRDs)由于其遗传复杂性和遗传模式的多样性,可能具有重大的诊断挑战。先进的基因分型工具,如外显子组测序(ES),为识别致病变异和改善疾病管理提供了有希望的机会。这项回顾性研究的目的是在使用ES诊断为IRDs的患者中发现流行的致病性和新的变异。我们调查了154例临床诊断为IRDs的患者,其中非综合征型IRDs比综合征型IRDs更普遍(~56%对~44%)。在154名不相关的患者中,133名(约86%)遗传消退,其中色素性视网膜炎是最常见的亚型(占所有消退患者的26%)。在已知的IRD基因中鉴定出53种以前已知的变异和56种新的变异。常染色体隐性遗传在两种解决形式中占主导地位(112/133,84.21%),有46个新变体。这可能是由于研究家庭的高血亲率(114/133例,85.71%)。先前报道的TMEM67基因(c.725A >; G)和BBS2基因(c.471G >; A)以及AIPL1基因(c.834G >; A)的两种祖先始祖致病性变异也在我们的患者中普遍存在。有趣的是,在两个不相关的病例中发现了CEP290基因的相同的新型复合杂合子(c.3167C >; A和c.7024C >; T)。这项回顾性研究是在样本量和多样性方面的第一次尝试,以增加我们目前对伊朗东部人群中ird基因组成的了解。我们的研究结果可以促进遗传咨询和ird亚型分类,特别是在具有挑战性的病例中。
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来源期刊
Clinical Genetics
Clinical Genetics 医学-遗传学
CiteScore
6.50
自引率
0.00%
发文量
175
审稿时长
3-8 weeks
期刊介绍: Clinical Genetics links research to the clinic, translating advances in our understanding of the molecular basis of genetic disease for the practising clinical geneticist. The journal publishes high quality research papers, short reports, reviews and mini-reviews that connect medical genetics research with clinical practice. Topics of particular interest are: • Linking genetic variations to disease • Genome rearrangements and disease • Epigenetics and disease • The translation of genotype to phenotype • Genetics of complex disease • Management/intervention of genetic diseases • Novel therapies for genetic diseases • Developmental biology, as it relates to clinical genetics • Social science research on the psychological and behavioural aspects of living with or being at risk of genetic disease
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