Infrared Spectroscopy Coupled with Machine Learning Algorithms to Investigate Vascular Dysfunction in Ovariectomy: An Animal Model Study

IF 4.3 3区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY
Tháfanys S. Travezani*, Márcia H. C. Nascimento, Tagana R. da Cunha, Roger L. dos Santos, Francis L. Martin and Valerio G. Barauna, 
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引用次数: 0

Abstract

A decrease in female sex hormone levels in the body impairs vascular endothelium functioning, leading to vascular dysfunction associated with certain diseases. Animal models of ovariectomy are commonly used to understand its effects on vascular (dys)function. Fourier-transform infrared (FTIR) spectroscopy is a technique capable of extracting detailed molecular information and, as such, has been applied to various biological analyses. This study evaluated systemic changes in the ovariectomy model using mid-infrared spectroscopy. Thirty-eight serum samples from adult Wistar rats were analyzed and divided into 18 in the control group (SHAM) and 20 in the ovariectomized group (OVX). Bilateral ovariectomy was performed, followed by euthanasia of the rats after 15 days. The spectral collection was performed using the Bruker Alpha II equipment (Bruker, Germany), preprocessed, and analyzed using unsupervised analysis methods [principal component analysis (PCA)] and supervised analysis methods [partial least-squares discriminant analysis (PLS-DA)] (MATLAB 2023). For the PCA model, combinations between principal components (PCs) 1 to 4 were performed. Nevertheless, none of the PC combinations allowed a clear distinction between the OVX and SHAM groups. The PLS-DA model exhibited 66% sensitivity, 80% specificity, a false positive rate of 20%, and a false negative rate of 33%. The F-score was 0.727 and the accuracy was 72.7%. However, the y-permutation test demonstrated that this result was random. These results indicate that there is no significant difference in the systemic profile of rats subjected to ovariectomy surgery for 15 days when analyzed using mid-infrared spectroscopy.

红外光谱结合机器学习算法研究卵巢切除术中血管功能障碍:动物模型研究
体内女性性激素水平的降低会损害血管内皮功能,导致与某些疾病相关的血管功能障碍。卵巢切除术的动物模型通常用于了解其对血管(天)功能的影响。傅里叶变换红外光谱(FTIR)是一种能够提取详细分子信息的技术,因此已应用于各种生物分析。本研究使用中红外光谱评估卵巢切除术模型的全身变化。对38份成年Wistar大鼠血清进行分析,分为对照组(SHAM) 18份和去卵巢组(OVX) 20份。切除双侧卵巢,15天后安乐死。光谱采集使用Bruker Alpha II设备(德国Bruker)进行预处理,并使用无监督分析方法[主成分分析(PCA)]和监督分析方法[偏最小二乘判别分析(PLS-DA)] (MATLAB 2023)进行分析。对于PCA模型,主成分(PCs) 1 ~ 4之间进行组合。然而,没有一种PC组合能够在OVX组和SHAM组之间形成明显的区别。PLS-DA模型敏感性66%,特异性80%,假阳性率20%,假阴性率33%。f值为0.727,准确率为72.7%。然而,y置换检验证明这个结果是随机的。这些结果表明,在中红外光谱分析中,卵巢切除术后15天的大鼠的全身特征没有显著差异。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
ACS Omega
ACS Omega Chemical Engineering-General Chemical Engineering
CiteScore
6.60
自引率
4.90%
发文量
3945
审稿时长
2.4 months
期刊介绍: ACS Omega is an open-access global publication for scientific articles that describe new findings in chemistry and interfacing areas of science, without any perceived evaluation of immediate impact.
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