Identifying Research Hotspots and Trends in Psoriasis Literature: Autotuned Topic Modeling with Agent.

Sunsi Wu, Dan Wang, Xinpei Gu, Ruiheng Xiao, Hongzhi Gao, Bo Yang, Yanlan Kang
{"title":"Identifying Research Hotspots and Trends in Psoriasis Literature: Autotuned Topic Modeling with Agent.","authors":"Sunsi Wu, Dan Wang, Xinpei Gu, Ruiheng Xiao, Hongzhi Gao, Bo Yang, Yanlan Kang","doi":"10.1016/j.jid.2024.11.029","DOIUrl":null,"url":null,"abstract":"<p><p>The rapid expansion of psoriasis research literature presents challenges for efficient analysis and trend identification, necessitating advanced approaches. We propose AgenTopic, an interactive topic modeling framework that integrates BERT embeddings, dimensionality reduction, clustering, and a language model feedback loop to analyze psoriasis research literature from 2000 to 2023. Applied to PubMed articles, AgenTopic extracted 158 psoriasis-related topics across 8 categories, outperforming traditional methods in handling complex medical literature. Further trend analysis using multiple modeling techniques, including an SVR-Linear model, revealed non-linear patterns in research growth across categories (R<sup>2</sup> values 0.75-0.97). Key trends identified include focus on nail psoriasis and spondyloarthritis, shift from TNF-α to IL-17 in pathogenesis understanding, rapid development of biologics and small molecule inhibitors, and increased attention to comorbidities. We developed an interactive web tool to facilitate literature retrieval and trend identification. To our knowledge, this application of an agent-based interactive topic modeling framework to dermatological literature is previously unreported. Using only topic-modeled data, our framework achieved comparable performance to expert manual review in identifying research trends. AgenTopic performed better than several state-of-the-art topic modeling methods and demonstrated the potential of AI in advancing medical literature analysis.</p>","PeriodicalId":94239,"journal":{"name":"The Journal of investigative dermatology","volume":" ","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2025-01-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"The Journal of investigative dermatology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1016/j.jid.2024.11.029","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

Abstract

The rapid expansion of psoriasis research literature presents challenges for efficient analysis and trend identification, necessitating advanced approaches. We propose AgenTopic, an interactive topic modeling framework that integrates BERT embeddings, dimensionality reduction, clustering, and a language model feedback loop to analyze psoriasis research literature from 2000 to 2023. Applied to PubMed articles, AgenTopic extracted 158 psoriasis-related topics across 8 categories, outperforming traditional methods in handling complex medical literature. Further trend analysis using multiple modeling techniques, including an SVR-Linear model, revealed non-linear patterns in research growth across categories (R2 values 0.75-0.97). Key trends identified include focus on nail psoriasis and spondyloarthritis, shift from TNF-α to IL-17 in pathogenesis understanding, rapid development of biologics and small molecule inhibitors, and increased attention to comorbidities. We developed an interactive web tool to facilitate literature retrieval and trend identification. To our knowledge, this application of an agent-based interactive topic modeling framework to dermatological literature is previously unreported. Using only topic-modeled data, our framework achieved comparable performance to expert manual review in identifying research trends. AgenTopic performed better than several state-of-the-art topic modeling methods and demonstrated the potential of AI in advancing medical literature analysis.

求助全文
约1分钟内获得全文 求助全文
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信