Pooled screening for endogenous HHV-6 in subjects with coronary artery disease.

IF 1.9 4区 医学 Q3 GENETICS & HEREDITY
Virus Genes Pub Date : 2025-04-01 Epub Date: 2025-01-31 DOI:10.1007/s11262-025-02134-6
Rie Koide, Yoshie Nakashima, Shohei Kojima, Yohei Sotomi, Yasushi Sakata, Yasuhiko Sakata, Kaoru Ito, Nicholas F Parrish
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引用次数: 0

Abstract

Endogenous human herpesvirus 6 (eHHV-6) is integrated into the genomes of approximately 1% of individuals and has been linked to angina pectoris which, like myocardial infarction (MI), generally denotes coronary artery disease. To investigate this association further, we screened 2976 genomic DNA samples from patients with MI for eHHV-6 using multiplex qPCR. We identified 17 eHHV-6-positive individuals (0.57%), including 6 with eHHV-6A, 10 with eHHV-6B, and 1 with the solo-DR form, an eHHV-6B variant characterized by the presence of a single direct repeat (DR) within the host genome. While subjects with eHHV-6 had slightly higher total cholesterol levels, this difference was not statistically significant after correction for multiple testing. Our large-scale screening demonstrates the prevalence of eHHV-6 in MI patients and highlights the potential of this approach for studying its impact on diseases and other complex traits.

冠状动脉疾病患者内源性HHV-6的合并筛查
内源性人类疱疹病毒6 (eHHV-6)被整合到大约1%的个体基因组中,并与心绞痛有关,心绞痛与心肌梗死(MI)一样,通常表示冠状动脉疾病。为了进一步研究这种关联,我们使用多重qPCR技术从心肌梗死患者中筛选了2976份eHHV-6基因组DNA样本。我们鉴定出17例ehhv -6阳性个体(0.57%),包括6例eHHV-6A, 10例eHHV-6B, 1例solo-DR形式,eHHV-6B变体的特征是在宿主基因组中存在单个直接重复(DR)。虽然eHHV-6患者的总胆固醇水平略高,但经过多次测试校正后,这种差异没有统计学意义。我们的大规模筛查显示了eHHV-6在心肌梗死患者中的患病率,并强调了这种方法在研究其对疾病和其他复杂特征的影响方面的潜力。
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来源期刊
Virus Genes
Virus Genes 医学-病毒学
CiteScore
3.30
自引率
0.00%
发文量
76
审稿时长
3 months
期刊介绍: Viruses are convenient models for the elucidation of life processes. The study of viruses is again on the cutting edge of biological sciences: systems biology, genomics, proteomics, metagenomics, using the newest most powerful tools. Huge amounts of new details on virus interactions with the cell, other pathogens and the hosts – animal (including human), insect, fungal, plant, bacterial, and archaeal - and their role in infection and disease are forthcoming in perplexing details requiring analysis and comments. Virus Genes is dedicated to the publication of studies on the structure and function of viruses and their genes, the molecular and systems interactions with the host and all applications derived thereof, providing a forum for the analysis of data and discussion of its implications, and the development of new hypotheses.
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