{"title":"<i>Ascidiimonas meishanensis</i> sp. nov. and <i>Leptobacterium meishanense</i> sp. nov., two bacteria isolated from marine sediment in the East China Sea.","authors":"Hao Wang, Huiting Wang, Xinyu Liu, Dawoon Jung, Eun-Young Seo, Shan He, Weiyan Zhang, Lijian Ding","doi":"10.1099/ijsem.0.006653","DOIUrl":null,"url":null,"abstract":"<p><p>Two Gram-stain-negative, curved-rod-shaped, non-motile and aerobic bacteria W6<sup>T</sup> and I13<sup>T</sup> were isolated from marine sediment samples collected from Meishan Island located in the East China Sea. Catalase and oxidase activities and hydrolysis of Tween 40, 60 and 80 were positive for both strains, while nitrate reduction, indole production, methyl red reaction and H<sub>2</sub>S production were negative. Phylogenetic analyses based on 16S rRNA and genome sequences revealed that strains W6<sup>T</sup> and I13<sup>T</sup> formed distinct phylogenetic lineages within the genera <i>Ascidiimonas</i> and <i>Leptobacterium</i>, respectively. Strain W6<sup>T</sup> showed the closest relatedness to <i>Ascidiimonas aurantiaca</i> N5DA8-2C<sup>T</sup> with 93.9% 16S rRNA gene sequence similarity, 70.7% average nucleotide identity (ANI), 71.0% average amino acid identity (AAI) and 16.4% digital DNA-DNA hybridization (dDDH) values, while strain I13<sup>T</sup> was most closely related to <i>Leptobacterium flavescens</i> YM3-301<sup>T</sup> with 92.1% 16S rRNA gene sequence similarity, 70.5% ANI, 72.1% AAI and 17.2% dDDH values. The two novel strains shared 92.0% 16S rRNA gene sequence similarity to each other and were identified as two distinct species based on 70.7% ANI, 70.4% AAI and 17.1% dDDH values calculated using whole-genome sequences. The genomes of strains W6<sup>T</sup> and I13<sup>T</sup> were 4.59 Mbp with a G+C content of 34.5 mol% and 2.38 Mbp with a G+C content of 36.2 mol%, respectively. The only respiratory quinone was menaquinone-6, the major polar lipid was phosphatidylethanolamine and the major cellular fatty acids were iso-C<sub>15 : 0</sub>, iso-C<sub>15 : 1</sub> G and iso-C<sub>17 : 0</sub> 3-OH. Based on phenotypic, chemotaxonomic and genotypic data, strains W6<sup>T</sup> and I13<sup>T</sup> are considered to represent two novel species in the genera <i>Ascidiimonas</i> and <i>Leptobacterium</i>, respectively, in the family Flavobacteriaceae, for which the names <i>Ascidiimonas meishanensis</i> sp. nov. and <i>Leptobacterium meishanense</i> sp. nov. are proposed. The type strains are W6<sup>T</sup> (=KCTC 102201<sup>T</sup>=MCCC 1K08928<sup>T</sup>) and I13<sup>T</sup> (=KCTC 102202<sup>T</sup>=MCCC 1K08929<sup>T</sup>), respectively.</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"75 1","pages":""},"PeriodicalIF":2.0000,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"International journal of systematic and evolutionary microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1099/ijsem.0.006653","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
Two Gram-stain-negative, curved-rod-shaped, non-motile and aerobic bacteria W6T and I13T were isolated from marine sediment samples collected from Meishan Island located in the East China Sea. Catalase and oxidase activities and hydrolysis of Tween 40, 60 and 80 were positive for both strains, while nitrate reduction, indole production, methyl red reaction and H2S production were negative. Phylogenetic analyses based on 16S rRNA and genome sequences revealed that strains W6T and I13T formed distinct phylogenetic lineages within the genera Ascidiimonas and Leptobacterium, respectively. Strain W6T showed the closest relatedness to Ascidiimonas aurantiaca N5DA8-2CT with 93.9% 16S rRNA gene sequence similarity, 70.7% average nucleotide identity (ANI), 71.0% average amino acid identity (AAI) and 16.4% digital DNA-DNA hybridization (dDDH) values, while strain I13T was most closely related to Leptobacterium flavescens YM3-301T with 92.1% 16S rRNA gene sequence similarity, 70.5% ANI, 72.1% AAI and 17.2% dDDH values. The two novel strains shared 92.0% 16S rRNA gene sequence similarity to each other and were identified as two distinct species based on 70.7% ANI, 70.4% AAI and 17.1% dDDH values calculated using whole-genome sequences. The genomes of strains W6T and I13T were 4.59 Mbp with a G+C content of 34.5 mol% and 2.38 Mbp with a G+C content of 36.2 mol%, respectively. The only respiratory quinone was menaquinone-6, the major polar lipid was phosphatidylethanolamine and the major cellular fatty acids were iso-C15 : 0, iso-C15 : 1 G and iso-C17 : 0 3-OH. Based on phenotypic, chemotaxonomic and genotypic data, strains W6T and I13T are considered to represent two novel species in the genera Ascidiimonas and Leptobacterium, respectively, in the family Flavobacteriaceae, for which the names Ascidiimonas meishanensis sp. nov. and Leptobacterium meishanense sp. nov. are proposed. The type strains are W6T (=KCTC 102201T=MCCC 1K08928T) and I13T (=KCTC 102202T=MCCC 1K08929T), respectively.
期刊介绍:
Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names.
The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including:
Identification, characterisation and culture preservation
Microbial evolution and biodiversity
Molecular environmental work with strong taxonomic or evolutionary content
Nomenclature
Taxonomy and phylogenetics.