Aurantiacibacter poecillastricola sp. nov., Isolated from the Marine Sponge, Poecillastra wondoensis, and Reclassification of Erythrobacter alti as Aurantiacibacter alti comb. nov.
IF 2.5 4区 生物学Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
{"title":"<i>Aurantiacibacter poecillastricola</i> sp. nov., Isolated from the Marine Sponge, <i>Poecillastra wondoensis</i>, and Reclassification of <i>Erythrobacter alti</i> as <i>Aurantiacibacter alti</i> comb. nov.","authors":"Soo-Bin Kim, Kyung Hyun Kim, Jin-Sook Park","doi":"10.4014/jmb.2409.09010","DOIUrl":null,"url":null,"abstract":"<p><p>A Gram-stain-negative, facultative anaerobic rods, designated as strain 219JJ12-13<sup>T</sup>, was isolated from a marine sponge, <i>Poecillastra wondoensis</i>, in Jeju-do, Republic of Korea. The cells displayed catalase and oxidase activity and were non-motile. Strain 219JJ12-13<sup>T</sup> grew at 10-37°C (optimum, 25-30°C), pH 6.0-8.5 (optimum, pH 7.0-7.5), and in the presence of 0.5-6.0% (w/v) NaCl (optimum, 4.0-5.0%). The polar lipids comprised disphosphatidylglycerol, phosphatidylglycerol, phosphatidylcoline, phosphatidylethanolamine, sphingoglycolipid, two aminophosphoglycolipid, unidentified phospholipid, and two unidentified lipids. The isoprenoid quinone was identified as Q-10, and predominant cellular fatty acids were C<sub>17:1</sub> <i>ω</i>6<i>c</i>, summed feature 3 (C<sub>16:1</sub> <i>ω</i>7<i>c</i>/C<sub>16:1</sub> <i>ω</i>6<i>c</i>), and summed feature 8 (C<sub>16:1</sub> <i>ω</i>7<i>c</i>/C18:1 <i>ω</i>6<i>c</i>). The G+C content of the genomic DNA was 63.3%. The 16S rRNA gene and genome sequences-based phylogenetic analyses showed that strain 219JJ12-13<sup>T</sup> formed a distinct phyletic clade within the genus <i>Aurantiacibacter</i>. Genome relatedness values, including average nucleotide identity and digital DNA-DNA hybridization among strain 219JJ12-13<sup>T</sup> and closely related type strains, were 74.0-80.2% and 18.2-22.8%, respectively, both markedly below the thresholds for species delineation. Based on polyphasic taxonomic approach, strain 219JJ12-13<sup>T</sup> represents a novel species of the genus <i>Aurantiacibacter</i>, and the name <i>Aurantiacibacter poecillastricola</i> sp. nov. is proposed. The type strain is 219JJ12-13<sup>T</sup> (= KACC 23236<sup>T</sup> = LMG 33060<sup>T</sup>). The reclassification of <i>Erythrobacter alti</i> to the genus <i>Aurantiacibacter</i> as <i>Aurantiacibacter alti</i> comb. nov. is also proposed (= KCCM 90261<sup>T</sup> = NBRC 111903<sup>T</sup>).</p>","PeriodicalId":16481,"journal":{"name":"Journal of microbiology and biotechnology","volume":"35 ","pages":"e2409010"},"PeriodicalIF":2.5000,"publicationDate":"2024-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11813356/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of microbiology and biotechnology","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.4014/jmb.2409.09010","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
A Gram-stain-negative, facultative anaerobic rods, designated as strain 219JJ12-13T, was isolated from a marine sponge, Poecillastra wondoensis, in Jeju-do, Republic of Korea. The cells displayed catalase and oxidase activity and were non-motile. Strain 219JJ12-13T grew at 10-37°C (optimum, 25-30°C), pH 6.0-8.5 (optimum, pH 7.0-7.5), and in the presence of 0.5-6.0% (w/v) NaCl (optimum, 4.0-5.0%). The polar lipids comprised disphosphatidylglycerol, phosphatidylglycerol, phosphatidylcoline, phosphatidylethanolamine, sphingoglycolipid, two aminophosphoglycolipid, unidentified phospholipid, and two unidentified lipids. The isoprenoid quinone was identified as Q-10, and predominant cellular fatty acids were C17:1ω6c, summed feature 3 (C16:1ω7c/C16:1ω6c), and summed feature 8 (C16:1ω7c/C18:1 ω6c). The G+C content of the genomic DNA was 63.3%. The 16S rRNA gene and genome sequences-based phylogenetic analyses showed that strain 219JJ12-13T formed a distinct phyletic clade within the genus Aurantiacibacter. Genome relatedness values, including average nucleotide identity and digital DNA-DNA hybridization among strain 219JJ12-13T and closely related type strains, were 74.0-80.2% and 18.2-22.8%, respectively, both markedly below the thresholds for species delineation. Based on polyphasic taxonomic approach, strain 219JJ12-13T represents a novel species of the genus Aurantiacibacter, and the name Aurantiacibacter poecillastricola sp. nov. is proposed. The type strain is 219JJ12-13T (= KACC 23236T = LMG 33060T). The reclassification of Erythrobacter alti to the genus Aurantiacibacter as Aurantiacibacter alti comb. nov. is also proposed (= KCCM 90261T = NBRC 111903T).
期刊介绍:
The Journal of Microbiology and Biotechnology (JMB) is a monthly international journal devoted to the advancement and dissemination of scientific knowledge pertaining to microbiology, biotechnology, and related academic disciplines. It covers various scientific and technological aspects of Molecular and Cellular Microbiology, Environmental Microbiology and Biotechnology, Food Biotechnology, and Biotechnology and Bioengineering (subcategories are listed below). Launched in March 1991, the JMB is published by the Korean Society for Microbiology and Biotechnology (KMB) and distributed worldwide.