Metagenomic profiling of plaque microbiota in Indian subjects: identified hidden ecological tapestry.

IF 1.8 4区 生物学 Q3 GENETICS & HEREDITY
Sangram Sandhu, Sachin Kumar, Paurabhi Singh, Balendra Pratap Singh, Sunit Kumar Jurel, Nand Lal, Mohit, Varun Sharma, Niraj Rai, Pooran Chand
{"title":"Metagenomic profiling of plaque microbiota in Indian subjects: identified hidden ecological tapestry.","authors":"Sangram Sandhu, Sachin Kumar, Paurabhi Singh, Balendra Pratap Singh, Sunit Kumar Jurel, Nand Lal, Mohit, Varun Sharma, Niraj Rai, Pooran Chand","doi":"10.1007/s00294-024-01306-5","DOIUrl":null,"url":null,"abstract":"<p><p>Dental plaque biofilms are the primary etiologic factor for various chronic oral infectious diseases. In recent years, dental plaque shows enormous potential to know about an individual microbiota. Various microbiome studies of oral cavity from different geographical locations reveals abundance of microbial species. Although, the representation of Indian population in this respect is limited, which make us curious to undergo this study. This study investigates the dental plaque microbiota of North Indian individuals based on their age, gender, and dietary patterns; specifically, food preference and availability of water source using 16 S rRNA metagenomics analysis. The findings from this study revealed that Streptococcus levels are high across genders, age groups, and water source, highlighting its role as a predominant dental caries associated species like Streptococcus mutans, Streptococcus pyogenes, Streptococcus sobrinus and Streptococcus oralis in the studied population groups. Additionally, the abundance of Actinomyces is observed higher in young individuals and females whereas Fusobacterium and Leptotrichia were high in elderly individuals. Moreover, non-vegetarians have higher abundance of Streptococcus and Fusobacterium, whereas vegetarians show higher abundance of Prevotella and Leptotrichia. The study also highlights the influence of water type on bacterial composition of dental plaque in the studied population i.e., individuals consuming underground water has high abundance of Streptococcus, whereas individuals consuming RO water exhibit elevated Prevotella and Leptotrichia. Insights emerged from the analysis illuminates the complex dynamics of microbiota in dental plaque among North Indians. This study also highlight that this variation of microbiome is influenced by age, gender, and dietary habits (vegetarian or non-vegetarian lifestyle). These results will fill a significant knowledge gap regarding the Indian dental plaque microbiome but also offer a foundation to conduct metagenome studies and potential therapeutic implications for future personalized oral health interventions.</p>","PeriodicalId":10918,"journal":{"name":"Current Genetics","volume":"71 1","pages":"3"},"PeriodicalIF":1.8000,"publicationDate":"2025-01-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Current Genetics","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1007/s00294-024-01306-5","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0

Abstract

Dental plaque biofilms are the primary etiologic factor for various chronic oral infectious diseases. In recent years, dental plaque shows enormous potential to know about an individual microbiota. Various microbiome studies of oral cavity from different geographical locations reveals abundance of microbial species. Although, the representation of Indian population in this respect is limited, which make us curious to undergo this study. This study investigates the dental plaque microbiota of North Indian individuals based on their age, gender, and dietary patterns; specifically, food preference and availability of water source using 16 S rRNA metagenomics analysis. The findings from this study revealed that Streptococcus levels are high across genders, age groups, and water source, highlighting its role as a predominant dental caries associated species like Streptococcus mutans, Streptococcus pyogenes, Streptococcus sobrinus and Streptococcus oralis in the studied population groups. Additionally, the abundance of Actinomyces is observed higher in young individuals and females whereas Fusobacterium and Leptotrichia were high in elderly individuals. Moreover, non-vegetarians have higher abundance of Streptococcus and Fusobacterium, whereas vegetarians show higher abundance of Prevotella and Leptotrichia. The study also highlights the influence of water type on bacterial composition of dental plaque in the studied population i.e., individuals consuming underground water has high abundance of Streptococcus, whereas individuals consuming RO water exhibit elevated Prevotella and Leptotrichia. Insights emerged from the analysis illuminates the complex dynamics of microbiota in dental plaque among North Indians. This study also highlight that this variation of microbiome is influenced by age, gender, and dietary habits (vegetarian or non-vegetarian lifestyle). These results will fill a significant knowledge gap regarding the Indian dental plaque microbiome but also offer a foundation to conduct metagenome studies and potential therapeutic implications for future personalized oral health interventions.

印度受试者斑块微生物群的宏基因组分析:确定隐藏的生态挂毯。
牙菌斑生物膜是各种慢性口腔感染性疾病的主要病因。近年来,牙菌斑显示出了解单个微生物群的巨大潜力。不同地理位置的口腔微生物组研究表明,口腔微生物种类丰富。然而,印度人口在这方面的代表性有限,这使我们对进行这项研究感到好奇。本研究根据年龄、性别和饮食模式调查了北印度个体的牙菌斑微生物群;具体来说,利用16s rRNA宏基因组学分析食物偏好和水源可用性。本研究结果显示,在不同性别、不同年龄、不同水源的人群中,链球菌的水平都很高,这突出了它在研究人群中作为一种主要的龋齿相关物种,如变形链球菌、化脓性链球菌、sobrinus链球菌和oral链球菌。此外,放线菌的丰度在年轻个体和雌性中较高,而梭杆菌和纤毛菌在老年个体中较高。此外,非素食者的链球菌和梭杆菌的丰度更高,而素食者的普雷沃氏菌和钩毛菌的丰度更高。该研究还强调了水类型对研究人群牙菌斑细菌组成的影响,即饮用地下水的个体链球菌丰度高,而饮用反渗透水的个体普氏菌和钩毛菌含量升高。从分析中产生的见解阐明了北印度人牙菌斑中微生物群的复杂动态。这项研究还强调,这种微生物组的变化受到年龄、性别和饮食习惯(素食或非素食生活方式)的影响。这些结果将填补关于印度牙菌斑微生物组的重要知识空白,但也为开展宏基因组研究和未来个性化口腔健康干预的潜在治疗意义提供了基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Current Genetics
Current Genetics 生物-遗传学
CiteScore
6.00
自引率
0.00%
发文量
34
审稿时长
1 months
期刊介绍: Current Genetics publishes genetic, genomic, molecular and systems-level analysis of eukaryotic and prokaryotic microorganisms and cell organelles. All articles are peer-reviewed. The journal welcomes submissions employing any type of research approach, be it analytical (aiming at a better understanding), applied (aiming at practical applications), synthetic or theoretical. Current Genetics no longer accepts manuscripts describing the genome sequence of mitochondria/chloroplast of a small number of species. Manuscripts covering sequence comparisons and analyses that include a large number of species will still be considered.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信