Prediction Trough Concentrations of Valproic Acid Among Chinese Adult Patients with Epilepsy Using Machine Learning Techniques.

IF 3.5 3区 医学 Q2 CHEMISTRY, MULTIDISCIPLINARY
Pharmaceutical Research Pub Date : 2025-01-01 Epub Date: 2025-01-22 DOI:10.1007/s11095-025-03817-3
Nannan Yao, Qiongyue Zhao, Ying Cao, Dongshi Gu, Ning Zhang
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引用次数: 0

Abstract

Objective: This study aimed to establish an optimal model based on machine learning (ML) to predict Valproic acid (VPA) trough concentrations in Chinese adult epilepsy patients.

Methods: A single-center retrospective study was carried out at the Jinshan Hospital affiliated with Fudan University from January 2022 to December 2023. A total of 102 VPA trough concentrations were split into a derivation cohort and a validation cohort at a ratio of 8:2. Thirteen ML algorithms were developed using 27 variables in the derivation cohort and were filtered by the lowest mean absolute error (MAE) value. In addition, feature selection was applied to optimize the model.

Results: Ultimately, the extra tree algorithm was chosen to establish the personalized VPA trough concentration prediction model due to its best performance (MAE = 13.08). The SHapley Additive exPlanations (SHAP) plots were used to visualize and rank the importance of features, providing insights into how each feature influences the model's predictions. After feature selection, we found that the model with the top 9 variables [including daily dose, last dose, uric acid (UA), platelet (PLT), combination, gender, weight, albumin (ALB), aspartate aminotransferase (AST)] outperformed the model with 27 variables, with MAE of 6.82, RMSE of 9.62, R2 value of 0.720, relative accuracy (±20%) of 61.90%, and absolute accuracy (±20 mg/L) of 90.48%.

Conclusion: In conclusion, the trough concentration prediction model for VPA in Chinese adult epileptic patients based on the extra tree algorithm demonstrated strong predictive ability which is valuable for clinicians in medication guidance.

应用机器学习技术预测中国成年癫痫患者丙戊酸谷浓度。
目的:建立基于机器学习(ML)的丙戊酸谷浓度预测优化模型。方法:于2022年1月至2023年12月在复旦大学附属金山医院进行单中心回顾性研究。将102个VPA谷浓度按8:2的比例分成衍生队列和验证队列。使用衍生队列中的27个变量开发了13种ML算法,并通过最低平均绝对误差(MAE)值进行过滤。此外,采用特征选择对模型进行优化。结果:最终选择额外树算法建立个性化VPA波谷浓度预测模型,其MAE = 13.08,效果最佳。SHapley加性解释(SHAP)图用于可视化特征的重要性并对其进行排序,从而深入了解每个特征如何影响模型的预测。经过特征选择,我们发现包含前9个变量(日剂量、末剂量、尿酸(UA)、血小板(PLT)、组合、性别、体重、白蛋白(ALB)、天冬氨酸转肽酶(AST))的模型优于包含27个变量的模型,MAE为6.82,RMSE为9.62,R2值为0.720,相对准确度(±20%)为61.90%,绝对准确度(±20 mg/L)为90.48%。结论:综上所述,基于额外树算法的中国成人癫痫患者VPA谷浓度预测模型具有较强的预测能力,对临床医生的用药指导具有一定的参考价值。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Pharmaceutical Research
Pharmaceutical Research 医学-化学综合
CiteScore
6.60
自引率
5.40%
发文量
276
审稿时长
3.4 months
期刊介绍: Pharmaceutical Research, an official journal of the American Association of Pharmaceutical Scientists, is committed to publishing novel research that is mechanism-based, hypothesis-driven and addresses significant issues in drug discovery, development and regulation. Current areas of interest include, but are not limited to: -(pre)formulation engineering and processing- computational biopharmaceutics- drug delivery and targeting- molecular biopharmaceutics and drug disposition (including cellular and molecular pharmacology)- pharmacokinetics, pharmacodynamics and pharmacogenetics. Research may involve nonclinical and clinical studies, and utilize both in vitro and in vivo approaches. Studies on small drug molecules, pharmaceutical solid materials (including biomaterials, polymers and nanoparticles) biotechnology products (including genes, peptides, proteins and vaccines), and genetically engineered cells are welcome.
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