Bistable Functions and Signaling Motifs in Systems Chemistry: Taking the Next Step Toward Synthetic Cells

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Indrajit Maity, Nathaniel Wagner, Dharm Dev, Gonen Ashkenasy
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引用次数: 0

Abstract

A key challenge in modern chemistry research is to mimic life-like functions using simple molecular networks and the integration of such networks into the first functional artificial cell. Central to this endeavor is the development of signaling elements that can regulate the cell function in time and space by producing entities of code with specific information to induce downstream activity. Such artificial signaling motifs can emerge in nonequilibrium systems, exhibiting complex dynamic behavior like bistability, multistability, oscillations, and chaos. However, the de novo, bottom-up design of such systems remains challenging, primarily because the kinetic characteristics and energy aspects yielding bifurcation have not yet been globally defined. We herein review our recent work that focuses on the design and functional analysis of peptide-based networks, propelled by replication reactions and exhibiting bistable behavior. Furthermore, we rationalize and discuss their exploitation and implementation as variable signaling motifs in homogeneous and heterogeneous environments.

Abstract Image

系统化学中的双稳态功能和信号基序:迈向合成细胞的下一步
现代化学研究的一个关键挑战是使用简单的分子网络来模拟类似生命的功能,并将这些网络整合到第一个功能性人造细胞中。这一努力的核心是信号元件的发展,这些信号元件可以通过产生具有特定信息的编码实体来诱导下游活动,从而在时间和空间上调节细胞功能。这种人工信号基序可以出现在非平衡系统中,表现出复杂的动态行为,如双稳性、多稳性、振荡和混沌。然而,这种系统的从头开始,自下而上的设计仍然具有挑战性,主要是因为产生分岔的动力学特性和能量方面尚未得到全局定义。在此,我们回顾了我们最近的工作,主要集中在设计和功能分析基于肽的网络,由复制反应推动,并表现出双稳态行为。此外,我们合理化并讨论了它们在同质和异质环境中作为可变信号基序的开发和实现。
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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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