Role of Non-Canonical Stacking Interactions of Heterocyclic RNA Bases in Ribosome Function

IF 2.3 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Valeriy G. Metelev, Eugene F. Baulin, Alexey A. Bogdanov
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引用次数: 0

Abstract

Identification and analysis of repetitive elements (motifs) in DNA, RNA, and protein macromolecules is an important step in studying structure and functions of these biopolymers. Functional role of NA-BSE (non-adjacent base-stacking element, a widespread tertiary structure motif in various RNAs) in RNA–RNA interactions at various stages of the ribosome function during translation has been investigated in this work. Motifs of this type have been described to date that are reversibly formed during mRNA decoding, moving of the ribosome subunits relative to each other, and moving mRNA and tRNA along the ribosome during translocation. The EF-G-dependent NA-BSE formation involving 5S rRNA and 23S rRNA nucleotide residues is considered separately.

杂环RNA碱基非规范堆叠相互作用在核糖体功能中的作用
鉴定和分析DNA、RNA和蛋白质大分子中的重复元件(基序)是研究这些生物聚合物结构和功能的重要步骤。NA-BSE(非相邻碱基堆叠元件,在各种rna中广泛存在的三级结构基序)在翻译过程中核糖体功能的各个阶段的RNA-RNA相互作用中的功能作用已经在这项工作中进行了研究。迄今为止,这种类型的基序已经被描述为在mRNA解码、核糖体亚基相对移动以及在易位过程中沿着核糖体移动mRNA和tRNA时可逆形成的基序。单独考虑涉及5S rRNA和23S rRNA核苷酸残基的ef - g依赖性NA-BSE形成。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Biochemistry (Moscow)
Biochemistry (Moscow) 生物-生化与分子生物学
CiteScore
4.70
自引率
3.60%
发文量
139
审稿时长
2 months
期刊介绍: Biochemistry (Moscow) is the journal that includes research papers in all fields of biochemistry as well as biochemical aspects of molecular biology, bioorganic chemistry, microbiology, immunology, physiology, and biomedical sciences. Coverage also extends to new experimental methods in biochemistry, theoretical contributions of biochemical importance, reviews of contemporary biochemical topics, and mini-reviews (News in Biochemistry).
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