Import of global high-risk clones is the primary driver of carbapenemase-producing Pseudomonas aeruginosa in Norway.

Bjørg Christina Haldorsen, Ørjan Samuelsen, Jessin Janice, Miriam Sare, Mari Molvik, Arnfinn Sundsfjord, The Norwegian Study Group On Cp-Pa, Torunn Pedersen
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Abstract

Introduction. Infections by carbapenemase-producing Pseudomonas aeruginosa (CP-Pa) are concerning due to limited treatment options. The emergence of multidrug-resistant (MDR) high-risk clones is an essential driver in the global rise of CP-Pa.Hypothesis/Gap Statement. Insights into the molecular epidemiology of CP-Pa are crucial to understanding its clinical and public health impact. Despite the low incidence of infections in Norway, global spread requires an understanding of regional dissemination patterns.Aim. This study aimed to investigate the phenotypic and genotypic characteristics of CP-Pa isolates in Norway and molecular epidemiology by utilizing available metadata.Methodology. The study collection comprised all verified CP-Pa isolated in Norway from 2006 to 2022 (n=67) obtained from clinical (75%; n=50) or screening samples (22%; n=15) or had no available information (3%; n=2). Phenotypic analyses included antimicrobial susceptibility testing against clinically relevant antipseudomonal antibiotics and comparative testing for carbapenemase production using three different methods (β-CARBA, IMI/IMD gradient test and Coris O.K.N.V.I RESIST-5). Whole-genome sequencing was performed to identify virulence factors, resistance determinants and genomic relatedness.Results. The isolates were categorized as MDR (n=39) encoding Verona integron-encoded metallo-β-lactamase (VIM) (n=28), New Delhi metallo-β-lactamase (NDM) (n=6), imipenemase metallo-β-lactamase (IMP) (n=4) or Guiana extended spectrum metallo-β-lactamase (n=1) carbapenemases or extensively drug-resistant (XDR; n=28) encoding VIM (n=11), NDM (n=9) or IMP (n=8) carbapenemases. CP-Pa numbers ranged from 1 to 7 annually, peaking at 17 in 2022. Most isolates (n=64) were associated with international travel or hospitalization abroad. Phylogenetic analyses identified nine clusters of closely related genomes, with one suspected case of domestic patient-to-patient transmission. Among 21 detected sequence types, several were global high-risk clones, including ST235 (n=12), ST111 (n=9), ST773 (n=9), ST253 (n=3), ST357 (n=3), ST395 (n=3), ST823 (n=3), ST233 (n=2), ST654 (n=2), ST260 (n=1) and ST308 (n=1), covering 72% of the Norwegian isolates. ST1047 (IMP-1) and ST773 (NDM-1) were associated with Ukrainian war victims. Carbapenemase detection rates for phenotypic tests were 88% (β-CARBA), 91% (IMI/IMD) and 94% (Coris) in our collection.Conclusion. The study highlights the low incidence yet high genomic diversity of CP-Pa in Norway and the dominance of high-risk clones linked to imports, contributing to the high proportion of XDR.

进口全球高风险克隆是挪威产碳青霉烯酶铜绿假单胞菌的主要驱动因素。
介绍。碳青霉烯酶产生铜绿假单胞菌(CP-Pa)感染是令人担忧的,由于有限的治疗方案。耐多药(MDR)高风险克隆的出现是全球CP-Pa上升的重要驱动因素。假设/差距语句。深入了解CP-Pa的分子流行病学对了解其临床和公共卫生影响至关重要。尽管挪威的感染率很低,但全球传播需要了解区域传播模式。本研究旨在利用现有的元数据,研究挪威CP-Pa分离株的表型和基因型特征以及分子流行病学。研究收集包括2006年至2022年在挪威分离的所有经过验证的CP-Pa (n=67),来自临床(75%;N =50)或筛选样本(22%;N =15)或没有可用信息(3%;n = 2)。表型分析包括临床相关抗假单胞菌抗生素的药敏试验和碳青霉烯酶产生的比较试验,采用三种不同的方法(β-CARBA, IMI/IMD梯度试验和Coris o.k.n.v i resistance -5)。进行全基因组测序以确定毒力因素、耐药性决定因素和基因组相关性。分离菌株分类为编码维罗纳整合子编码的金属β-内酰胺酶(VIM) (n=28)、新德里金属β-内酰胺酶(NDM) (n=6)、亚胺培烯酶金属β-内酰胺酶(IMP) (n=4)或圭亚那延伸谱金属β-内酰胺酶(n=1)碳青霉烯酶或广泛耐药(XDR;n=28)编码VIM (n=11)、NDM (n=9)或IMP (n=8)碳青霉烯酶。每年的CP-Pa数量从1到7不等,在2022年达到17个峰值。大多数分离株(n=64)与国际旅行或国外住院有关。系统发育分析确定了9个密切相关基因组聚类,其中1例疑似国内患者间传播病例。在21个检测到的序列类型中,有几个是全球高危克隆,包括ST235 (n=12)、ST111 (n=9)、ST773 (n=9)、ST253 (n=3)、ST357 (n=3)、ST395 (n=3)、ST823 (n=3)、ST233 (n=2)、ST654 (n=2)、ST260 (n=1)和ST308 (n=1),覆盖了挪威分离株的72%。ST1047 (IMP-1)和ST773 (NDM-1)与乌克兰战争受害者有关。表型检测的碳青霉烯酶检出率分别为88% (β-CARBA)、91% (IMI/IMD)和94% (Coris)。该研究强调了挪威CP-Pa发病率低但基因组多样性高,以及与进口有关的高风险克隆占主导地位,这导致了XDR的高比例。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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