Luteimonas salinilitoris sp. nov., isolated from the shore soil of saline lake in Tibet of China.

IF 2 3区 生物学 Q4 MICROBIOLOGY
Xuan Zhang, You-Jun Liao, Zi-Xuan Liu, Rui Wang, Hong-Can Liu, Yan-Yan Zheng, Yu-Guang Zhou, Ya-Jing Yu, Lu Xue, Ai-Hua Li
{"title":"<i>Luteimonas salinilitoris</i> sp. nov., isolated from the shore soil of saline lake in Tibet of China.","authors":"Xuan Zhang, You-Jun Liao, Zi-Xuan Liu, Rui Wang, Hong-Can Liu, Yan-Yan Zheng, Yu-Guang Zhou, Ya-Jing Yu, Lu Xue, Ai-Hua Li","doi":"10.1099/ijsem.0.006630","DOIUrl":null,"url":null,"abstract":"<p><p>Five aerobic, Gram-stain-negative bacterial strains, designated as C3-2-a3<sup>T</sup>, B3-2-R+30, C3-2-a4, C3-2-M3 and C3-2-M8, were isolated from the coastal soil of LungmuCo Lake in the Tibet Autonomous Region, PR China. Phylogenetic analyses based on 16S rRNA genes and genomes indicated that these isolates belonged to the genus <i>Luteimonas</i> and showed a high similarity to <i>Luteimonas suaedae</i> LNNU 24178<sup>T</sup> (99.01%), <i>Luteimonas endophytica</i> RD2P54<sup>T</sup> (98.80%) and <i>Luteimonas salinisoli</i> SJ-92<sup>T</sup> (97.67%). The average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values between strain C3-2-a3<sup>T</sup> and related reference strains <i>Luteimonas suaedae</i> LNNU 24178<sup>T</sup>, <i>Luteimonas endophytica</i> RD2P54<sup>T</sup> and <i>Luteimonas salinisoli</i> SJ-92<sup>T</sup> were 91.89, 83.11 and 83.86% and 46.90, 26.90 and 28.20%, respectively. All values were below the thresholds for delineating species, supporting their classification as novel species of the genus <i>Luteimonas</i>. The genomic DNA G+C content of strains C3-2-a3<sup>T</sup> was 68.39%. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine and two unidentified phospholipids. The predominant respiratory quinone was ubiquinone-8 (Q-8), aligning with the characteristics of members of the genus <i>Luteimonas</i>. The major fatty acids (>10.0%) of strain C3-2-a3<sup>T</sup> were identified as iso-C<sub>11 :  0</sub>, iso-C<sub>15 :  0</sub>, iso-C<sub>16 : 0</sub> and iso-C<sub>17 : 1</sub> <i> ω</i>9<i>c</i>. Based on the results of phenotypic, physiological, chemotaxonomic and genotypic characterizations, we propose that the isolates represent a novel species of genus <i>Luteimonas</i>, for which the name <i>Luteimonas salinilitoris s</i>p. nov is proposed. The type strain is C3-2-a3<sup>T</sup> (=CGMCC 1.14507<sup>T</sup>=KCTC 8642<sup>T</sup>).</p>","PeriodicalId":14390,"journal":{"name":"International journal of systematic and evolutionary microbiology","volume":"75 1","pages":""},"PeriodicalIF":2.0000,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"International journal of systematic and evolutionary microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1099/ijsem.0.006630","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Five aerobic, Gram-stain-negative bacterial strains, designated as C3-2-a3T, B3-2-R+30, C3-2-a4, C3-2-M3 and C3-2-M8, were isolated from the coastal soil of LungmuCo Lake in the Tibet Autonomous Region, PR China. Phylogenetic analyses based on 16S rRNA genes and genomes indicated that these isolates belonged to the genus Luteimonas and showed a high similarity to Luteimonas suaedae LNNU 24178T (99.01%), Luteimonas endophytica RD2P54T (98.80%) and Luteimonas salinisoli SJ-92T (97.67%). The average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values between strain C3-2-a3T and related reference strains Luteimonas suaedae LNNU 24178T, Luteimonas endophytica RD2P54T and Luteimonas salinisoli SJ-92T were 91.89, 83.11 and 83.86% and 46.90, 26.90 and 28.20%, respectively. All values were below the thresholds for delineating species, supporting their classification as novel species of the genus Luteimonas. The genomic DNA G+C content of strains C3-2-a3T was 68.39%. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine and two unidentified phospholipids. The predominant respiratory quinone was ubiquinone-8 (Q-8), aligning with the characteristics of members of the genus Luteimonas. The major fatty acids (>10.0%) of strain C3-2-a3T were identified as iso-C11 :  0, iso-C15 :  0, iso-C16 : 0 and iso-C17 : 1  ω9c. Based on the results of phenotypic, physiological, chemotaxonomic and genotypic characterizations, we propose that the isolates represent a novel species of genus Luteimonas, for which the name Luteimonas salinilitoris sp. nov is proposed. The type strain is C3-2-a3T (=CGMCC 1.14507T=KCTC 8642T).

西藏盐湖湖岸土壤分离的黄体单胞菌sp. nov.。
从西藏龙木湖滨海土壤中分离到5株革兰氏阴性好氧菌,分别为C3-2-a3T、B3-2-R+30、C3-2-a4、C3-2-M3和C3-2-M8。基于16S rRNA基因和基因组的系统发育分析表明,这些分离株属于黄体单胞菌属,与suaedluteimonas LNNU 24178T(99.01%)、Luteimonas endophytica RD2P54T(98.80%)和Luteimonas salinisoli SJ-92T(97.67%)具有高度的相似性。菌株C3-2-a3T与相关参考菌株suaedae Luteimonas LNNU 24178T、Luteimonas endophytica RD2P54T和Luteimonas salinisoli SJ-92T的平均核苷酸一致性(ANI)和数字DNA-DNA杂交(dDDH)值分别为91.89、83.11和83.86%和46.90、26.90和28.20%。所有的值都低于划分种的阈值,支持它们作为Luteimonas属新种的分类。菌株C3-2-a3T基因组DNA G+C含量为68.39%。主要极性脂质为二磷脂酰甘油、磷脂酰甘油、磷脂酰乙醇胺和两种未识别的磷脂。主要的呼吸醌是泛醌-8 (Q-8),与黄体单胞菌属成员的特征一致。菌株C3-2-a3T的主要脂肪酸(>10.0%)鉴定为iso-C11: 0、iso-C15: 0、iso-C16: 0和iso-C17: 1 ω9c。根据表型、生理、化学分类和基因型分析结果,我们认为该分离株为黄体单胞菌属的一个新种,并将其命名为Luteimonas salinilitoris sp. nov。型应变为C3-2-a3T (=CGMCC 1.14507T=KCTC 8642T)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
CiteScore
5.20
自引率
21.40%
发文量
426
审稿时长
1 months
期刊介绍: Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names. The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including: Identification, characterisation and culture preservation Microbial evolution and biodiversity Molecular environmental work with strong taxonomic or evolutionary content Nomenclature Taxonomy and phylogenetics.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信