{"title":"Efficient Sampling for Machine Learning Electron Density and Its Response in Real Space.","authors":"Chaoqiang Feng, Yaolong Zhang, Bin Jiang","doi":"10.1021/acs.jctc.4c01355","DOIUrl":null,"url":null,"abstract":"<p><p>Electron density is a fundamental quantity that can in principle determine all ground state electronic properties of a given system. Although machine learning (ML) models for electron density based on either an atom-centered basis or a real-space grid have been proposed, the demand for a number of high-order basis functions or grid points is enormous. In this work, we propose an efficient grid-point sampling strategy that combines targeted sampling favoring a large density and a screening of grid points associated with linearly independent atomic features. This new sampling strategy is integrated with a field-induced recursively embedded atom neural network model to develop a real-space grid-based ML model for the electron density and its response to an electric field. This approach is applied to a QM9 molecular data set, a H<sub>2</sub>O/Pt(111) interfacial system, an Au(100) electrode, and an Au nanoparticle under an electric field. The number of training points is found to be much smaller than previous models, while yielding comparably accurate predictions for the electron density of the entire grid. The resultant machine-learned electron density model enables us to properly partition partial charge onto each atom and analyze the charge variation upon proton transfer in the H<sub>2</sub>O/Pt(111) system. The machine-learning electronic response model allows us to predict charge transfer and the electrostatic potential change induced by an electric field applied to an Au(100) electrode or an Au nanoparticle.</p>","PeriodicalId":45,"journal":{"name":"Journal of Chemical Theory and Computation","volume":" ","pages":""},"PeriodicalIF":5.7000,"publicationDate":"2025-01-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Chemical Theory and Computation","FirstCategoryId":"92","ListUrlMain":"https://doi.org/10.1021/acs.jctc.4c01355","RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
引用次数: 0
Abstract
Electron density is a fundamental quantity that can in principle determine all ground state electronic properties of a given system. Although machine learning (ML) models for electron density based on either an atom-centered basis or a real-space grid have been proposed, the demand for a number of high-order basis functions or grid points is enormous. In this work, we propose an efficient grid-point sampling strategy that combines targeted sampling favoring a large density and a screening of grid points associated with linearly independent atomic features. This new sampling strategy is integrated with a field-induced recursively embedded atom neural network model to develop a real-space grid-based ML model for the electron density and its response to an electric field. This approach is applied to a QM9 molecular data set, a H2O/Pt(111) interfacial system, an Au(100) electrode, and an Au nanoparticle under an electric field. The number of training points is found to be much smaller than previous models, while yielding comparably accurate predictions for the electron density of the entire grid. The resultant machine-learned electron density model enables us to properly partition partial charge onto each atom and analyze the charge variation upon proton transfer in the H2O/Pt(111) system. The machine-learning electronic response model allows us to predict charge transfer and the electrostatic potential change induced by an electric field applied to an Au(100) electrode or an Au nanoparticle.
期刊介绍:
The Journal of Chemical Theory and Computation invites new and original contributions with the understanding that, if accepted, they will not be published elsewhere. Papers reporting new theories, methodology, and/or important applications in quantum electronic structure, molecular dynamics, and statistical mechanics are appropriate for submission to this Journal. Specific topics include advances in or applications of ab initio quantum mechanics, density functional theory, design and properties of new materials, surface science, Monte Carlo simulations, solvation models, QM/MM calculations, biomolecular structure prediction, and molecular dynamics in the broadest sense including gas-phase dynamics, ab initio dynamics, biomolecular dynamics, and protein folding. The Journal does not consider papers that are straightforward applications of known methods including DFT and molecular dynamics. The Journal favors submissions that include advances in theory or methodology with applications to compelling problems.