Improving Reconstruction Speed of Positron Emission Particle Tracking by Efficient Gradient Calculation

IF 4.6 Q1 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING
Eunsik Choi;Yeseul Kim;Wonmo Sung
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Abstract

The development of molecular imaging algorithms and tools has advanced our understanding of the molecular dynamics in complex systems, such as tracking cells in vivo. One of these advancements, the positron emission particle tracking (PEPT) algorithm, allows particles to be tracked through a positron emission tomography (PET) scanner. The spatiotemporal B-spline reconstruction (SBSR) method of the PEPT algorithm is capable of tracking a single particle, such as a cell using PET with high accuracy. However, its slow computational speed, particularly with large data, results in time-intensive hyperparameter tuning, which is a limitation in real-world applications. This study introduces a novel approach, employing the backpropagation algorithm, commonly used in deep learning, to enhance the efficiency of gradient computation during particle trajectory reconstruction. Comparisons of the computational speed of the previous and current algorithms on a PEPT benchmark dataset show that the novel approach significantly increased the computational speed without compromising the tracking accuracy. Notably, we found that the difference in computation time between the current and previous algorithms increased as the size of the data increased. In conclusion, we have improved the SBSR method by efficiently computing the gradients, making it faster and more efficient. Even with bigger data, our approach keeps up, showing an improvement in computational speed.
利用高效梯度计算提高正电子发射粒子跟踪重建速度
分子成像算法和工具的发展促进了我们对复杂系统中分子动力学的理解,例如在体内跟踪细胞。其中一项进步是正电子发射粒子跟踪(PEPT)算法,该算法允许通过正电子发射断层扫描(PET)扫描仪跟踪粒子。PEPT算法的时空b样条重建(SBSR)方法能够对单个粒子(如细胞)进行高精度跟踪。然而,它的计算速度很慢,特别是在处理大数据时,会导致时间密集的超参数调优,这在实际应用中是一个限制。本文提出了一种新的方法,利用深度学习中常用的反向传播算法来提高粒子轨迹重建过程中的梯度计算效率。在一个PEPT基准数据集上比较了之前和当前算法的计算速度,结果表明该方法在不影响跟踪精度的情况下显著提高了计算速度。值得注意的是,我们发现当前算法和以前算法之间的计算时间差异随着数据大小的增加而增加。总之,我们改进了SBSR方法,通过高效地计算梯度,使其更快、更高效。即使有更大的数据,我们的方法也能跟上,显示出计算速度的提高。
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来源期刊
IEEE Transactions on Radiation and Plasma Medical Sciences
IEEE Transactions on Radiation and Plasma Medical Sciences RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING-
CiteScore
8.00
自引率
18.20%
发文量
109
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