Beerend G. A. Gerats, Jelmer M. Wolterink, Seb P. Mol, Ivo A. M. J. Broeders
{"title":"Neural fields for 3D tracking of anatomy and surgical instruments in monocular laparoscopic video clips","authors":"Beerend G. A. Gerats, Jelmer M. Wolterink, Seb P. Mol, Ivo A. M. J. Broeders","doi":"10.1049/htl2.12113","DOIUrl":null,"url":null,"abstract":"<p>Laparoscopic video tracking primarily focuses on two target types: surgical instruments and anatomy. The former could be used for skill assessment, while the latter is necessary for the projection of virtual overlays. Where instrument and anatomy tracking have often been considered two separate problems, in this article, a method is proposed for joint tracking of all structures simultaneously. Based on a single 2D monocular video clip, a neural field is trained to represent a continuous spatiotemporal scene, used to create 3D tracks of all surfaces visible in at least one frame. Due to the small size of instruments, they generally cover a small part of the image only, resulting in decreased tracking accuracy. Therefore, enhanced class weighting is proposed to improve the instrument tracks. The authors evaluate tracking on video clips from laparoscopic cholecystectomies, where they find mean tracking accuracies of 92.4% for anatomical structures and 87.4% for instruments. Additionally, the quality of depth maps obtained from the method's scene reconstructions is assessed. It is shown that these pseudo-depths have comparable quality to a state-of-the-art pre-trained depth estimator. On laparoscopic videos in the SCARED dataset, the method predicts depth with an MAE of 2.9 mm and a relative error of 9.2%. These results show the feasibility of using neural fields for monocular 3D reconstruction of laparoscopic scenes. Code is available via GitHub: https://github.com/Beerend/Surgical-OmniMotion.</p>","PeriodicalId":37474,"journal":{"name":"Healthcare Technology Letters","volume":"11 6","pages":"411-417"},"PeriodicalIF":2.8000,"publicationDate":"2024-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11665779/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Healthcare Technology Letters","FirstCategoryId":"1085","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1049/htl2.12113","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"ENGINEERING, BIOMEDICAL","Score":null,"Total":0}
引用次数: 0
Abstract
Laparoscopic video tracking primarily focuses on two target types: surgical instruments and anatomy. The former could be used for skill assessment, while the latter is necessary for the projection of virtual overlays. Where instrument and anatomy tracking have often been considered two separate problems, in this article, a method is proposed for joint tracking of all structures simultaneously. Based on a single 2D monocular video clip, a neural field is trained to represent a continuous spatiotemporal scene, used to create 3D tracks of all surfaces visible in at least one frame. Due to the small size of instruments, they generally cover a small part of the image only, resulting in decreased tracking accuracy. Therefore, enhanced class weighting is proposed to improve the instrument tracks. The authors evaluate tracking on video clips from laparoscopic cholecystectomies, where they find mean tracking accuracies of 92.4% for anatomical structures and 87.4% for instruments. Additionally, the quality of depth maps obtained from the method's scene reconstructions is assessed. It is shown that these pseudo-depths have comparable quality to a state-of-the-art pre-trained depth estimator. On laparoscopic videos in the SCARED dataset, the method predicts depth with an MAE of 2.9 mm and a relative error of 9.2%. These results show the feasibility of using neural fields for monocular 3D reconstruction of laparoscopic scenes. Code is available via GitHub: https://github.com/Beerend/Surgical-OmniMotion.
期刊介绍:
Healthcare Technology Letters aims to bring together an audience of biomedical and electrical engineers, physical and computer scientists, and mathematicians to enable the exchange of the latest ideas and advances through rapid online publication of original healthcare technology research. Major themes of the journal include (but are not limited to): Major technological/methodological areas: Biomedical signal processing Biomedical imaging and image processing Bioinstrumentation (sensors, wearable technologies, etc) Biomedical informatics Major application areas: Cardiovascular and respiratory systems engineering Neural engineering, neuromuscular systems Rehabilitation engineering Bio-robotics, surgical planning and biomechanics Therapeutic and diagnostic systems, devices and technologies Clinical engineering Healthcare information systems, telemedicine, mHealth.