Integrating OMICS-based platforms and analytical tools for diagnosis and management of pancreatic cancer: a review.

IF 3 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Molecular omics Pub Date : 2024-12-23 DOI:10.1039/d4mo00187g
Patrícia Sousa, Laurentina Silva, José S Câmara, Paula Guedes de Pinho, Rosa Perestrelo
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引用次数: 0

Abstract

Cancer remains the second leading cause of death worldwide, surpassed only by cardiovascular disease. From the different types of cancer, pancreatic cancer (PaC) has one of the lowest survival rates, with a survival rate of about 20% after the first year of diagnosis and about 8% after 5 years. The lack of highly sensitive and specific biomarkers, together with the absence of symptoms in the early stages, determines a late diagnosis, which is associated with a decrease in the effectiveness of medical intervention, regardless of its nature - surgery and/or chemotherapy. This review provides an updated overview of recent studies combining multi-OMICs approaches (e.g., proteomics, metabolomics) with analytical tools, highlighting the synergy between high-throughput molecular data generation and precise analytical tools such as LC-MS, GC-MS and MALDI-TOF MS. This combination significantly improves the detection, quantification and identification of biomolecules in complex biological systems and represents the latest advances in understanding PaC management and the search for effective diagnostic tools. Large-scale data analysis coupled with bioinformatics tools enables the identification of specific genetic mutations, gene expression patterns, pathways, networks, protein modifications and metabolic signatures associated with PaC pathogenesis, progression and treatment response through the integration of multi-OMICs data.

整合基于omics的平台和分析工具用于胰腺癌的诊断和管理:综述
癌症仍然是全球第二大死因,仅次于心血管疾病。在不同类型的癌症中,胰腺癌(PaC)是生存率最低的癌症之一,诊断后第一年的生存率约为20%,5年后约为8%。缺乏高度敏感和特异性的生物标志物,加上在早期阶段没有症状,决定了晚期诊断,这与医疗干预的有效性降低有关,无论其性质如何-手术和/或化疗。本文综述了近期将多组学方法(如蛋白质组学、代谢组学)与分析工具相结合的最新研究,强调了高通量分子数据生成与精确分析工具(如LC-MS、GC-MS和MALDI-TOF ms)之间的协同作用。复杂生物系统中生物分子的定量和鉴定,代表了理解PaC管理和寻找有效诊断工具的最新进展。通过整合多组学数据,结合生物信息学工具进行大规模数据分析,可以识别与PaC发病、进展和治疗反应相关的特定基因突变、基因表达模式、途径、网络、蛋白质修饰和代谢特征。
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来源期刊
Molecular omics
Molecular omics Biochemistry, Genetics and Molecular Biology-Biochemistry
CiteScore
5.40
自引率
3.40%
发文量
91
期刊介绍: Molecular Omics publishes high-quality research from across the -omics sciences. Topics include, but are not limited to: -omics studies to gain mechanistic insight into biological processes – for example, determining the mode of action of a drug or the basis of a particular phenotype, such as drought tolerance -omics studies for clinical applications with validation, such as finding biomarkers for diagnostics or potential new drug targets -omics studies looking at the sub-cellular make-up of cells – for example, the subcellular localisation of certain proteins or post-translational modifications or new imaging techniques -studies presenting new methods and tools to support omics studies, including new spectroscopic/chromatographic techniques, chip-based/array technologies and new classification/data analysis techniques. New methods should be proven and demonstrate an advance in the field. Molecular Omics only accepts articles of high importance and interest that provide significant new insight into important chemical or biological problems. This could be fundamental research that significantly increases understanding or research that demonstrates clear functional benefits. Papers reporting new results that could be routinely predicted, do not show a significant improvement over known research, or are of interest only to the specialist in the area are not suitable for publication in Molecular Omics.
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