Propidium Monoazide Integrated With qPCR Enables Rapid and Universal Detection of Infectious Porcine Reproductive and Respiratory Syndrome Viruses

IF 3.5 2区 农林科学 Q2 INFECTIOUS DISEASES
Wenhao Qi, Yuejia Qiu, Dashi Zhao, Ming Qiu, Hong Lin, Meng Cui, Shuai Yang, Wanglong Zheng, Jianzhong Zhu, Nanhua Chen
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Abstract

Infectious porcine reproductive and respiratory syndrome virus (PRRSV) causes PRRS, but noninfectious PRRSV cannot. PCR and ELISA are commonly used for PRRSV detection but they cannot discriminate PRRSV infectivity. Virus isolation is a gold standard to determine virus infectivity. However, it is time-consuming. Therefore, we developed a propidium monoazide (PMA) qPCR assay for rapid and universal detection of infectious PRRSV in this study. After comparing the inactivation efficacies of distinct disinfectants, ultraviolet (UV) light, and heat, heat at 72°C for 15 min was determined as an effective strategy for PRRSV inactivation, which was confirmed by virus isolation and immunofluorescence assay (IFA) detection. In addition, PMA pretreatment parameters were optimized, including PMA concentration (5 μM), PMA binding time (25 min), PMA binding temperature (37°C), and photolysis time (25 min). The optimal concentration of primers and probes adapted from our previous study was redetermined. The optimized PMA-qPCR assay exhibited satisfied specificity, sensitivity, and reproducibility. Furthermore, the new PMA-qPCR was applied on the detection of 270 clinical samples (including 57 environmental feces, 177 lungs, 33 lymph nodes [LN], and 3 sera) and compared with previously developed qPCR. Eighty samples were qPCR positive, while only 63 samples were PMA-qPCR positive. No virus could be isolated in the 17 qPCR-positive but PMA-qPCR-negative clinical samples; meanwhile, PRRSV could be isolated in representative PMA-qPCR-positive samples, supporting that only live PRRSV isolates in distinct samples could be detected by this PMA-qPCR assay. In conclusion, this study provides the first PMA-qPCR assay for rapid and universal detection of infectious PRRSV, offering an alternative and effective method for PRRSV diagnosis, prevention, and control.

Abstract Image

结合 qPCR 的单氮化丙啶可实现猪繁殖与呼吸综合征病毒的快速通用检测
传染性猪繁殖与呼吸综合征病毒(PRRSV)会导致 PRRS,但非传染性 PRRSV 不会。PCR 和 ELISA 通常用于检测 PRRSV,但它们不能区分 PRRSV 的感染性。病毒分离是确定病毒传染性的黄金标准。然而,这种方法耗时较长。因此,我们在本研究中开发了一种单氮化丙啶(PMA)qPCR 检测方法,用于快速、普遍地检测传染性 PRRSV。在比较了不同消毒剂、紫外线(UV)和加热的灭活效果后,72℃加热 15 分钟被确定为有效的 PRRSV 灭活策略,病毒分离和免疫荧光检测(IFA)证实了这一点。此外,还优化了 PMA 预处理参数,包括 PMA 浓度(5 μM)、PMA 结合时间(25 分钟)、PMA 结合温度(37°C)和光解时间(25 分钟)。根据我们之前的研究,重新确定了引物和探针的最佳浓度。优化后的 PMA-qPCR 检测法具有令人满意的特异性、灵敏度和重现性。此外,新的 PMA-qPCR 被用于检测 270 份临床样本(包括 57 份环境粪便、177 份肺脏、33 份淋巴结 [LN] 和 3 份血清),并与之前开发的 qPCR 进行了比较。有 80 个样本呈 qPCR 阳性,而只有 63 个样本呈 PMA-qPCR 阳性。在 17 个 qPCR 阳性但 PMA-qPCR 阴性的临床样本中无法分离出病毒;而在具有代表性的 PMA-qPCR 阳性样本中却能分离出 PRRSV,这证明只有不同样本中的活 PRRSV 分离物才能被这种 PMA-qPCR 检测法检测到。总之,本研究提供了首个用于快速、普遍检测传染性 PRRSV 的 PMA-qPCR 检测方法,为 PRRSV 的诊断、预防和控制提供了另一种有效的方法。
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来源期刊
Transboundary and Emerging Diseases
Transboundary and Emerging Diseases 农林科学-传染病学
CiteScore
8.90
自引率
9.30%
发文量
350
审稿时长
1 months
期刊介绍: Transboundary and Emerging Diseases brings together in one place the latest research on infectious diseases considered to hold the greatest economic threat to animals and humans worldwide. The journal provides a venue for global research on their diagnosis, prevention and management, and for papers on public health, pathogenesis, epidemiology, statistical modeling, diagnostics, biosecurity issues, genomics, vaccine development and rapid communication of new outbreaks. Papers should include timely research approaches using state-of-the-art technologies. The editors encourage papers adopting a science-based approach on socio-economic and environmental factors influencing the management of the bio-security threat posed by these diseases, including risk analysis and disease spread modeling. Preference will be given to communications focusing on novel science-based approaches to controlling transboundary and emerging diseases. The following topics are generally considered out-of-scope, but decisions are made on a case-by-case basis (for example, studies on cryptic wildlife populations, and those on potential species extinctions): Pathogen discovery: a common pathogen newly recognised in a specific country, or a new pathogen or genetic sequence for which there is little context about — or insights regarding — its emergence or spread. Prevalence estimation surveys and risk factor studies based on survey (rather than longitudinal) methodology, except when such studies are unique. Surveys of knowledge, attitudes and practices are within scope. Diagnostic test development if not accompanied by robust sensitivity and specificity estimation from field studies. Studies focused only on laboratory methods in which relevance to disease emergence and spread is not obvious or can not be inferred (“pure research” type studies). Narrative literature reviews which do not generate new knowledge. Systematic and scoping reviews, and meta-analyses are within scope.
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