Temporal resolution trumps spectral resolution in UAV-based monitoring of cereal senescence dynamics.

IF 4.7 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Flavian Tschurr, Lukas Roth, Nicola Storni, Olivia Zumsteg, Achim Walter, Jonas Anderegg
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引用次数: 0

Abstract

Background: Senescence is a complex developmental process that is regulated by a multitude of environmental, genetic, and physiological factors. Optimizing the timing and dynamics of this process has the potential to significantly impact crop adaptation to future climates and for maintaining grain yield and quality, particularly under terminal stress. Accurately capturing the dynamics of senescence and isolating the genetic variance component requires frequent assessment as well as intense field testing. Here, we evaluated and compared the potential of temporally dense drone-based RGB- and multispectral image sequences for this purpose. Regular measurements were made throughout the grain filling phase for more than 600 winter wheat genotypes across three experiments in a high-yielding environment of temperate Europe. At the plot level, multispectral and RGB indices were extracted, and time series were modelled using different parametric and semi-parametric models. The capability of these approaches to track senescence was evaluated based on estimated model parameters, with corresponding parameters derived from repeated visual scorings as a reference. This approach represents the need for remote-sensing based proxies that capture the entire process, from the onset to the conclusion of senescence, as well as the rate of the progression.

Results: Our results indicated the efficacy of both RGB and multispectral reflectance indices in monitoring senescence dynamics and accurately identifying key temporal parameters characterizing this phase, comparable to more sophisticated proximal sensing techniques that offer limited throughput. Correlation coefficients of up to 0.8 were observed between multispectral (NDVIred668-index) and visual scoring, respectively 0.9 between RGB (ExGR-index) and visual scoring. Sub-sampling of measurement events demonstrated that the timing and frequency of measurements were highly influential, arguably even more than the choice of sensor.

Conclusions: Remote-sensing based proxies derived from both RGB and multispectral sensors can capture the senescence process accurately. The sub-sampling emphasized the importance of timely and frequent assessments, but also highlighted the need for robust methods that enable such frequent assessments to be made under variable environmental conditions. The proposed measurement and data processing strategies can improve the measurement and understanding of senescence dynamics, facilitating adaptive crop breeding strategies in the context of climate change.

在基于无人机的谷物衰老动态监测中,时间分辨率胜过光谱分辨率。
背景:衰老是一个复杂的发育过程,受多种环境、遗传和生理因素的调控。优化这一过程的时间和动态有可能显著影响作物对未来气候的适应,并保持粮食产量和质量,特别是在末端胁迫下。准确地捕捉衰老的动态和分离遗传变异成分需要频繁的评估以及密集的现场测试。在这里,我们评估并比较了基于无人机的时间密集RGB和多光谱图像序列在这方面的潜力。在欧洲温带高产环境中进行的三项试验中,对600多种冬小麦基因型在籽粒灌浆期进行了定期测量。在地块水平上,提取多光谱和RGB指数,并使用不同的参数和半参数模型对时间序列进行建模。基于估计的模型参数,以重复视觉评分得出的相应参数作为参考,评估了这些方法跟踪衰老的能力。这种方法表明需要基于遥感的替代方法来捕捉从衰老开始到结束的整个过程,以及衰老的进展速度。结果:我们的研究结果表明,RGB和多光谱反射指数在监测衰老动力学和准确识别表征这一阶段的关键时间参数方面的有效性,可与更复杂的近端传感技术相媲美,后者提供有限的通量。多光谱(ndvired668指数)与视觉评分的相关系数高达0.8,RGB (exgr指数)与视觉评分的相关系数高达0.9。测量事件的子采样表明,测量的时间和频率有很大的影响,可以说甚至超过了传感器的选择。结论:基于RGB和多光谱传感器的遥感代理可以准确地捕捉衰老过程。分抽样强调了及时和经常进行评估的重要性,但也强调需要强有力的方法,使这种经常的评估能够在变化的环境条件下进行。提出的测量和数据处理策略可以提高对衰老动力学的测量和理解,促进在气候变化背景下的适应性作物育种策略。
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来源期刊
Plant Methods
Plant Methods 生物-植物科学
CiteScore
9.20
自引率
3.90%
发文量
121
审稿时长
2 months
期刊介绍: Plant Methods is an open access, peer-reviewed, online journal for the plant research community that encompasses all aspects of technological innovation in the plant sciences. There is no doubt that we have entered an exciting new era in plant biology. The completion of the Arabidopsis genome sequence, and the rapid progress being made in other plant genomics projects are providing unparalleled opportunities for progress in all areas of plant science. Nevertheless, enormous challenges lie ahead if we are to understand the function of every gene in the genome, and how the individual parts work together to make the whole organism. Achieving these goals will require an unprecedented collaborative effort, combining high-throughput, system-wide technologies with more focused approaches that integrate traditional disciplines such as cell biology, biochemistry and molecular genetics. Technological innovation is probably the most important catalyst for progress in any scientific discipline. Plant Methods’ goal is to stimulate the development and adoption of new and improved techniques and research tools and, where appropriate, to promote consistency of methodologies for better integration of data from different laboratories.
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