Stefan Angerbauer;Franz Enzenhofer;Tobias Pankratz;Medina Hamidovic;Andreas Springer;Werner Haselmayr
{"title":"Novel Nano-Scale Computing Unit for the IoBNT: Concept and Practical Considerations","authors":"Stefan Angerbauer;Franz Enzenhofer;Tobias Pankratz;Medina Hamidovic;Andreas Springer;Werner Haselmayr","doi":"10.1109/TMBMC.2024.3397050","DOIUrl":null,"url":null,"abstract":"The Internet of Bio-Nano Things (IoBNT) is a novel framework that has the potential to enable transformative applications in healthcare and nano-medicine. It consists of artificial or natural tiny devices, so-called Bio-Nano Things (BNTs), that can be placed in the human body to carry out specific tasks (e.g., sensing) and are connected to the Internet. However, due to their small size their computation capabilities are limited, which restricts their ability to process data and make decision directly in the human body. Thus, we address this issue and propose a novel nano-scale computing architecture that performs matrix multiplications, which is one of the most important operations in signal processing and machine learning. The computation principle is based on diffusion-based propagation between connected compartments and chemical reactions within some compartments. The weights of the matrix can be set independently through adjusting the volume of the compartments. We present a stochastic and a dynamical model of the proposed structure. The stochastic model provides an analytical solution for the input-output relation in the steady state, assuming slow reaction rates. The dynamical model provides important insights into the systems temporal dynamics. Finally, micro- and mesoscopic simulations verify the proposed approach.","PeriodicalId":36530,"journal":{"name":"IEEE Transactions on Molecular, Biological, and Multi-Scale Communications","volume":"10 4","pages":"549-565"},"PeriodicalIF":2.4000,"publicationDate":"2024-03-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=10534193","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"IEEE Transactions on Molecular, Biological, and Multi-Scale Communications","FirstCategoryId":"1085","ListUrlMain":"https://ieeexplore.ieee.org/document/10534193/","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"ENGINEERING, ELECTRICAL & ELECTRONIC","Score":null,"Total":0}
引用次数: 0
Abstract
The Internet of Bio-Nano Things (IoBNT) is a novel framework that has the potential to enable transformative applications in healthcare and nano-medicine. It consists of artificial or natural tiny devices, so-called Bio-Nano Things (BNTs), that can be placed in the human body to carry out specific tasks (e.g., sensing) and are connected to the Internet. However, due to their small size their computation capabilities are limited, which restricts their ability to process data and make decision directly in the human body. Thus, we address this issue and propose a novel nano-scale computing architecture that performs matrix multiplications, which is one of the most important operations in signal processing and machine learning. The computation principle is based on diffusion-based propagation between connected compartments and chemical reactions within some compartments. The weights of the matrix can be set independently through adjusting the volume of the compartments. We present a stochastic and a dynamical model of the proposed structure. The stochastic model provides an analytical solution for the input-output relation in the steady state, assuming slow reaction rates. The dynamical model provides important insights into the systems temporal dynamics. Finally, micro- and mesoscopic simulations verify the proposed approach.
期刊介绍:
As a result of recent advances in MEMS/NEMS and systems biology, as well as the emergence of synthetic bacteria and lab/process-on-a-chip techniques, it is now possible to design chemical “circuits”, custom organisms, micro/nanoscale swarms of devices, and a host of other new systems. This success opens up a new frontier for interdisciplinary communications techniques using chemistry, biology, and other principles that have not been considered in the communications literature. The IEEE Transactions on Molecular, Biological, and Multi-Scale Communications (T-MBMSC) is devoted to the principles, design, and analysis of communication systems that use physics beyond classical electromagnetism. This includes molecular, quantum, and other physical, chemical and biological techniques; as well as new communication techniques at small scales or across multiple scales (e.g., nano to micro to macro; note that strictly nanoscale systems, 1-100 nm, are outside the scope of this journal). Original research articles on one or more of the following topics are within scope: mathematical modeling, information/communication and network theoretic analysis, standardization and industrial applications, and analytical or experimental studies on communication processes or networks in biology. Contributions on related topics may also be considered for publication. Contributions from researchers outside the IEEE’s typical audience are encouraged.