Metagenomic Analysis of the Buccal Microbiome by Nanopore Sequencing Reveals Structural Differences in the Microbiome of a Patient with Molar Incisor Hypomineralization (MIH) Compared to a Healthy Child-Case Study.

IF 5.6 2区 生物学
Wojciech Tynior, Małgorzata Kłósek, Silvia Salatino, Piotr Cuber, Dorota Hudy, Dariusz Nałęcz, Yuen-Ting Chan, Carla Gustave, Joanna Katarzyna Strzelczyk
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Abstract

Molar incisor hypomineralization (MIH) is a qualitative developmental defect that affects the enamel tissue of permanent molars and can also occur in permanent incisors. Enamel affected by MIH has reduced hardness, increased porosity, and a higher organic content than unaffected enamel. These characteristics predispose the enamel to accumulation of bacteria and a higher prevalence of caries lesions. Through a groundbreaking metagenomic analysis of the buccal mucosal sample from a patient with MIH, we explored the intricacies of its microbiome compared to a healthy control using state-of-the-art nanopore long-read sequencing. Out of the 210 bacterial taxa identified in the MIH microbiome, we found Streptococcus and Haemophilus to be the most abundant genera. The bacteria with the highest read counts in the patient with MIH included Streptococcus mitis, Haemophilus parainfluenzae, Streptococcus pneumoniae, Rothia dentocariosa, and Gemella haemolysans. Our results revealed a striking contrast between healthy and MIH affected children, with a higher dominance and number of pathogenic species (S. pneumoniae, H. influenzae, and N. meningitidis) and reduced diversity in the MIH-affected patient. This distinct microbial profile not only sheds light on MIH-affected patients, but paves the way for future research, inspiring deeper understanding and larger scale studies.

通过纳米孔测序对口腔微生物组进行宏基因组分析,揭示了与健康儿童病例研究相比,磨牙切牙低矿化(MIH)患者微生物组的结构差异。
磨牙低矿化(MIH)是一种影响恒磨牙牙釉质组织的质性发育缺陷,也可发生在恒磨牙。受MIH影响的牙釉质硬度降低,孔隙率增加,有机含量高于未受影响的牙釉质。这些特点使牙釉质容易积聚细菌,更容易患龋齿。通过对一名MIH患者的口腔黏膜样本进行开创性的宏基因组分析,我们利用最先进的纳米孔长读测序技术,探索了其微生物组与健康对照的复杂性。在MIH微生物组中鉴定的210个细菌分类群中,我们发现链球菌和嗜血杆菌是最丰富的属。在MIH患者中,读数最高的细菌包括:链球菌炎、副流感嗜血杆菌、肺炎链球菌、齿状牙纹罗氏菌和溶血球菌。我们的研究结果揭示了健康儿童和感染MIH的儿童之间的显著差异,在感染MIH的患者中,具有更高的优势和致病物种(肺炎链球菌、流感嗜血杆菌和脑膜炎奈瑟菌)的数量和多样性。这种独特的微生物特征不仅揭示了受mih影响的患者,而且为未来的研究铺平了道路,激发了更深入的理解和更大规模的研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
自引率
10.70%
发文量
13472
审稿时长
1.7 months
期刊介绍: The International Journal of Molecular Sciences (ISSN 1422-0067) provides an advanced forum for chemistry, molecular physics (chemical physics and physical chemistry) and molecular biology. It publishes research articles, reviews, communications and short notes. Our aim is to encourage scientists to publish their theoretical and experimental results in as much detail as possible. Therefore, there is no restriction on the length of the papers or the number of electronics supplementary files. For articles with computational results, the full experimental details must be provided so that the results can be reproduced. Electronic files regarding the full details of the calculation and experimental procedure, if unable to be published in a normal way, can be deposited as supplementary material (including animated pictures, videos, interactive Excel sheets, software executables and others).
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