The mitogenomes of two species of sea pigs, Scotoplanes clarki and Protelpidia murrayi (Elasipodida: Holothuroidea: Echinodermata).

IF 0.5 4区 生物学 Q4 GENETICS & HEREDITY
Mitochondrial DNA. Part B, Resources Pub Date : 2024-12-09 eCollection Date: 2024-01-01 DOI:10.1080/23802359.2024.2438272
Camryn N Morey, Greg W Rouse
{"title":"The mitogenomes of two species of sea pigs, <i>Scotoplanes clarki</i> and <i>Protelpidia murrayi</i> (Elasipodida: Holothuroidea: Echinodermata).","authors":"Camryn N Morey, Greg W Rouse","doi":"10.1080/23802359.2024.2438272","DOIUrl":null,"url":null,"abstract":"<p><p>Mitochondrial genomes of <i>Scotoplanes</i> <i>clarki</i> and <i>Protelpidia murrayi</i> are presented, each with 13 protein coding genes, two rRNA genes, and 22 tRNA genes. That of <i>Scotoplanes clarki</i> has 15,909 base pairs and that of <i>Protelpidia murrayi</i> is 15,896 base pairs. There is a suspected tandem repeat region of undetermined length in the assemblies of both <i>Scotoplanes clarki</i> and <i>Protelpidia murrayi</i>. The gene order of both mitogenomes is identical to that of other Elasipodida. Phylogenetic analysis revealed that <i>Protelpidia murrayi</i> lies within the <i>Scotoplanes</i> clade, suggesting that <i>Scotoplanes</i> is paraphyletic. Sequencing of the type species, <i>Scotoplanes globosa</i>, is needed to confirm if <i>Protelpidia murrayi</i> should be renamed as <i>Scotoplanes murrayi</i>.</p>","PeriodicalId":18647,"journal":{"name":"Mitochondrial DNA. Part B, Resources","volume":"9 12","pages":"1664-1668"},"PeriodicalIF":0.5000,"publicationDate":"2024-12-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11632918/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Mitochondrial DNA. Part B, Resources","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/23802359.2024.2438272","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"Q4","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0

Abstract

Mitochondrial genomes of Scotoplanes clarki and Protelpidia murrayi are presented, each with 13 protein coding genes, two rRNA genes, and 22 tRNA genes. That of Scotoplanes clarki has 15,909 base pairs and that of Protelpidia murrayi is 15,896 base pairs. There is a suspected tandem repeat region of undetermined length in the assemblies of both Scotoplanes clarki and Protelpidia murrayi. The gene order of both mitogenomes is identical to that of other Elasipodida. Phylogenetic analysis revealed that Protelpidia murrayi lies within the Scotoplanes clade, suggesting that Scotoplanes is paraphyletic. Sequencing of the type species, Scotoplanes globosa, is needed to confirm if Protelpidia murrayi should be renamed as Scotoplanes murrayi.

两种海猪clarki Scotoplanes和Protelpidia murrayi的有丝分裂基因组(弹性足目:刺皮目:棘皮目)。
clarki Scotoplanes和Protelpidia murrayi线粒体基因组分别包含13个蛋白质编码基因、2个rRNA基因和22个tRNA基因。clarki Scotoplanes的碱基对为15,909对,而Protelpidia murrayi的碱基对为15,896对。clarki Scotoplanes和Protelpidia murrayi的组合中都存在一个长度未知的串联重复区。这两个有丝分裂基因组的基因顺序与其他弹性足类相同。系统发育分析表明,原心足位于Scotoplanes分支中,表明Scotoplanes是副进化的。需要对模式种Scotoplanes globosa进行测序,以确定Protelpidia murrayi是否应该重新命名为Scotoplanes murrayi。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Mitochondrial DNA. Part B, Resources
Mitochondrial DNA. Part B, Resources Biochemistry, Genetics and Molecular Biology-Molecular Biology
CiteScore
1.30
自引率
20.00%
发文量
670
期刊介绍: This open access journal publishes high-quality and concise research articles reporting the sequence of full mitochondrial genomes, and short communications focusing on the physical, chemical, and biochemical aspects of mtDNA and proteins involved in mtDNA metabolism and interactions.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信