Mechanisms Underlying the Attenuating Effects of Bugantang on Liver Fibrosis based on Network Pharmacology, Molecular Docking, and Molecular Dynamics Simulation.

Taojing Zhang, Jia Chang, Zengle Zheng, Guobi Chen, Yiping Wu, Jinxiang Xiang, Jing Chen
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Abstract

Background: Liver fibrosis, a chronic liver disease, threatens people's health, increases the burden of healthcare, and currently lacks effective treatment measures. Bugantang (BGT) is a traditional Chinese herbal prescription from Jin Kui Yi with promising potential for treating liver fibrosis. Despite this potential, the efficacy and mechanism for treating liver fibrosis remain unclear.

Objective: To primarily prove the efficacy, predict the active components of BGT, and explore the mechanism of BGT on liver fibrosis.

Methods: The liver condition of CCL4-induced mice was examined using hematoxylin and eosin staining. The targets and active compounds of BGT were sourced from HERB and TCMSP databases, while the targets related to liver fibrosis were acquired from DisGeNET, Gene Expression Omnibus, and GeneCards databases. The core targets were identified, and the network of protein-protein interactions was established. KEGG and GO analyses were performed on DAVID. Molecular docking and molecular dynamics simulations assessed the active components' interactions with potential targets.

Results: A total of 215 targets and 152 active compounds were identified for BGT. The network analysis identified kaempferol, quercetin, 2-(2,4-dihydroxyphenyl)-7-hydroxy-4Hchromen- 4-one, sitosterol, naringenin, adenosine, plo, and beta-sitosterol as potential key compounds, and AKT1, MMP9, SRC, TNF, ESR1, NF-κB, and PPARG as potential key targets. KEGG and GO analyses revealed that the therapeutic effect of BGT on liver fibrosis may be associated with the PI3K-AKT and MAPK signaling pathways, as well as cell apoptosis, protein phosphorylation, and inflammation. Molecular docking demonstrated high-affinity binding of the identified targets to the active compounds. Additionally, molecular dynamics simulation further confirmed that the bindings of AKT1-beta-sitosterol and MMP9-quercetin exhibited good stability.

Conclusions: The potential of BGT in alleviating liver fibrosis may be attributed to a combination of various active compounds, targets, and pathways. These results could support the use of BGT in treating liver fibrosis and facilitate the development of new drug candidates for this condition.

基于网络药理学、分子对接、分子动力学模拟的补肝汤抗肝纤维化机制研究
背景:肝纤维化是一种慢性肝病,威胁着人们的健康,增加了医疗负担,目前缺乏有效的治疗措施。补肝汤是一种来自金葵义的传统中药,具有治疗肝纤维化的潜力。尽管有这种潜力,但治疗肝纤维化的疗效和机制尚不清楚。目的:初步证明白骨精的疗效,预测其有效成分,探讨白骨精治疗肝纤维化的作用机制。方法:采用苏木精和伊红染色法观察ccl4诱导小鼠的肝脏状况。BGT的靶点和活性化合物来源于HERB和TCMSP数据库,与肝纤维化相关的靶点来源于DisGeNET、Gene Expression Omnibus和GeneCards数据库。鉴定核心靶点,建立蛋白-蛋白相互作用网络。对DAVID进行KEGG和GO分析。分子对接和分子动力学模拟评估了活性成分与潜在靶标的相互作用。结果:共鉴定出BGT的215个靶点和152个活性化合物。网络分析发现山奈酚、槲皮素、2-(2,4-二羟基苯基)-7-羟基- 4hchromen - 4-one、谷甾醇、柚皮素、腺苷、plo和β -谷甾醇是潜在的关键化合物,AKT1、MMP9、SRC、TNF、ESR1、NF-κ b和PPARG是潜在的关键靶点。KEGG和GO分析显示,BGT对肝纤维化的治疗作用可能与PI3K-AKT和MAPK信号通路以及细胞凋亡、蛋白磷酸化和炎症有关。分子对接表明,鉴定的靶点与活性化合物具有高亲和力结合。此外,分子动力学模拟进一步证实了akt1 - β -谷甾醇与mmp9 -槲皮素的结合具有良好的稳定性。结论:BGT减轻肝纤维化的潜力可能归因于各种活性化合物、靶点和途径的结合。这些结果可以支持BGT在治疗肝纤维化中的应用,并促进这种疾病的新候选药物的开发。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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