SenMayo transcriptomic senescence panel highlights glial cells in the ageing mouse and human retina.

IF 4.1 Q2 GERIATRICS & GERONTOLOGY
Samyuktha Suresh, Gayathri Karthik, John F Ouyang, Vicki Chrysostomou, See Aik Tang, Enrico Petretto, Jonathan G Crowston, Katharina C Bell
{"title":"SenMayo transcriptomic senescence panel highlights glial cells in the ageing mouse and human retina.","authors":"Samyuktha Suresh, Gayathri Karthik, John F Ouyang, Vicki Chrysostomou, See Aik Tang, Enrico Petretto, Jonathan G Crowston, Katharina C Bell","doi":"10.1038/s41514-024-00187-9","DOIUrl":null,"url":null,"abstract":"<p><p>There is a growing need to better characterise senescent cells in the CNS and retina. The recently published SenMayo gene panel was developed to identify transcriptomic signatures of senescence across multiple organ systems, but the retina was not included. While other approaches have identified senescent signatures in the retina, these have largely focused on experimental models in young animals. We therefore conducted a detailed single-cell RNA-seq analysis to identify senescent cell populations in the retina of different aged mice and compared these with five comprehensive human and mouse retina and brain transcriptome datasets. Transcriptomic signatures of senescence were most apparent in mouse and human retinal glial cells, with IL4, 13 and 10 and the AP1 pathway being the most prominent markers involved. Similar levels of transcriptional senescence were observed in the retinal glia of young and old mice, whereas the human retina showed significantly increased enrichment scores with advancing age.</p>","PeriodicalId":94160,"journal":{"name":"npj aging","volume":"10 1","pages":"60"},"PeriodicalIF":4.1000,"publicationDate":"2024-11-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11608257/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"npj aging","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1038/s41514-024-00187-9","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"GERIATRICS & GERONTOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

There is a growing need to better characterise senescent cells in the CNS and retina. The recently published SenMayo gene panel was developed to identify transcriptomic signatures of senescence across multiple organ systems, but the retina was not included. While other approaches have identified senescent signatures in the retina, these have largely focused on experimental models in young animals. We therefore conducted a detailed single-cell RNA-seq analysis to identify senescent cell populations in the retina of different aged mice and compared these with five comprehensive human and mouse retina and brain transcriptome datasets. Transcriptomic signatures of senescence were most apparent in mouse and human retinal glial cells, with IL4, 13 and 10 and the AP1 pathway being the most prominent markers involved. Similar levels of transcriptional senescence were observed in the retinal glia of young and old mice, whereas the human retina showed significantly increased enrichment scores with advancing age.

SenMayo转录组衰老面板突出显示老化小鼠和人类视网膜中的胶质细胞。
人们越来越需要更好地描述中枢神经系统和视网膜中的衰老细胞。最近发表的SenMayo基因小组是为了识别多器官系统衰老的转录组特征而开发的,但视网膜不包括在内。虽然其他方法已经确定了视网膜中的衰老特征,但这些方法主要集中在年轻动物的实验模型上。因此,我们进行了详细的单细胞RNA-seq分析,以鉴定不同年龄小鼠视网膜中的衰老细胞群,并将其与五个综合的人和小鼠视网膜和脑转录组数据集进行比较。衰老的转录组特征在小鼠和人视网膜胶质细胞中最为明显,其中IL4、13和10以及AP1通路是最显著的标志物。在年轻和老年小鼠的视网膜胶质细胞中观察到相似水平的转录衰老,而人类视网膜随着年龄的增长显示出显著增加的富集评分。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
CiteScore
8.90
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信