Model Selection for Ordinary Differential Equations: A Statistical Testing Approach

IF 1.3 3区 生物学 Q4 MATHEMATICAL & COMPUTATIONAL BIOLOGY
Itai Dattner, Shota Gugushvili, Oleksandr Laskorunskyi
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引用次数: 0

Abstract

Ordinary differential equations (ODEs) are foundational tools in modeling intricate dynamics across a gamut of scientific disciplines. Yet, a possibility to represent a single phenomenon through multiple ODE models, driven by different understandings of nuances in internal mechanisms or abstraction levels, presents a model selection challenge. This study introduces a testing-based approach for ODE model selection amidst statistical noise. Rooted in the model misspecification framework, we adapt classical statistical paradigms (Vuong and Hotelling) to the ODE context, allowing for the comparison and ranking of diverse causal explanations without the constraints of nested models. Our simulation studies numerically investigate the statistical properties of the test, demonstrating its attainment of the nominal size and power across various settings. Real-world data examples further underscore the algorithm's applicability in practice. To foster accessibility and encourage real-world applications, we provide a user-friendly Python implementation of our model selection algorithm, bridging theoretical advancements with hands-on tools for the scientific community.

Abstract Image

常微分方程的模型选择:统计检验方法》。
常微分方程(ODEs)是各学科复杂动力学建模的基础工具。然而,由于对内部机制或抽象程度的细微差别有不同的理解,通过多个 ODE 模型表示单一现象的可能性给模型选择带来了挑战。本研究介绍了一种基于测试的方法,用于在统计噪声中选择 ODE 模型。植根于模型错配框架,我们将经典统计范式(Vuong 和 Hotelling)应用于 ODE,从而可以在不受嵌套模型限制的情况下对不同的因果解释进行比较和排序。我们的模拟研究从数值上研究了该检验的统计特性,证明它在各种环境下都能达到标称规模和功率。真实世界的数据实例进一步强调了该算法在实践中的适用性。为了提高可访问性并鼓励实际应用,我们为模型选择算法提供了用户友好的 Python 实现,为科学界架起了理论进展与实践工具之间的桥梁。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Biometrical Journal
Biometrical Journal 生物-数学与计算生物学
CiteScore
3.20
自引率
5.90%
发文量
119
审稿时长
6-12 weeks
期刊介绍: Biometrical Journal publishes papers on statistical methods and their applications in life sciences including medicine, environmental sciences and agriculture. Methodological developments should be motivated by an interesting and relevant problem from these areas. Ideally the manuscript should include a description of the problem and a section detailing the application of the new methodology to the problem. Case studies, review articles and letters to the editors are also welcome. Papers containing only extensive mathematical theory are not suitable for publication in Biometrical Journal.
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