A copper complex receptor for nanomolar sulfide sensing and applications in DNA/BSA binding

IF 4.1 3区 化学 Q2 CHEMISTRY, PHYSICAL
Dipankar Das , Aritra Roy , Cauê P. Souza , Somnath Mondal , Sourav Sutradhar , Parnashabari Sarkar , Felipe Fantuzzi , Biswa Nath Ghosh
{"title":"A copper complex receptor for nanomolar sulfide sensing and applications in DNA/BSA binding","authors":"Dipankar Das ,&nbsp;Aritra Roy ,&nbsp;Cauê P. Souza ,&nbsp;Somnath Mondal ,&nbsp;Sourav Sutradhar ,&nbsp;Parnashabari Sarkar ,&nbsp;Felipe Fantuzzi ,&nbsp;Biswa Nath Ghosh","doi":"10.1016/j.jphotochem.2024.116154","DOIUrl":null,"url":null,"abstract":"<div><div>Traditionally toxic sulfide species (S<sup>2–</sup>, HS<sup>–</sup>, and H<sub>2</sub>S) play indispensable roles in various biological, environmental, and industrial processes. However, excessive exposure to these species can result in numerous chronic diseases. Considering the importance of sulfide recognition, we have synthesized and characterized a simple 1:1 Cu(II) complex of <strong>L</strong> (<strong>CuCl<sub>2</sub>L</strong> receptor) based on a substituted 2,6-dipyrazinylpyridine (dppy) moiety (<strong>L</strong> = 4-(2,6-di(pyrazin-2-yl)pyridin-4-yl)-<em>N</em>,<em>N</em>-dimethylaniline). The complex was analyzed both experimentally and computationally using DFT and TD-DFT calculations. The <em>in-situ</em> prepared <strong>CuCl<sub>2</sub>L</strong> receptor is employed to selectively recognize sulfide species (detection limit: 82.50 nM) in the presence of other anions in higher concentration (ten equivalents of F<sup>–</sup>, Cl<sup>–</sup>, Br<sup>–</sup>, I<sup>–</sup>, CH<sub>3</sub>CO<sub>2</sub><sup>–</sup>, HCO<sub>3</sub><sup>–</sup>, H<sub>2</sub>PO<sub>4</sub><sup>–</sup>, NO<sub>3</sub><sup>–</sup>, SO<sub>3</sub><sup>2–</sup>, SO<sub>4</sub><sup>2–</sup>, S<sub>2</sub>O<sub>3</sub><sup>2–</sup>, CO<sub>3</sub><sup>2–</sup>, and HPO<sub>4</sub><sup>2–</sup> (10 mM)) in aqueous acetonitrile (2:1 v/v<em>,</em> 10 mM HEPES buffer, pH 7.4) through absorption spectral studies. Furthermore, the receptor is successfully utilized for various real-time detection applications and demonstrated significant intercalative binding interaction with Calf–Thymus DNA (CT-DNA) and good binding interactions with bovine serum albumin (BSA), supported by viscometry and molecular docking studies.</div></div>","PeriodicalId":16782,"journal":{"name":"Journal of Photochemistry and Photobiology A-chemistry","volume":"461 ","pages":"Article 116154"},"PeriodicalIF":4.1000,"publicationDate":"2024-11-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Photochemistry and Photobiology A-chemistry","FirstCategoryId":"92","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1010603024006981","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
引用次数: 0

Abstract

Traditionally toxic sulfide species (S2–, HS, and H2S) play indispensable roles in various biological, environmental, and industrial processes. However, excessive exposure to these species can result in numerous chronic diseases. Considering the importance of sulfide recognition, we have synthesized and characterized a simple 1:1 Cu(II) complex of L (CuCl2L receptor) based on a substituted 2,6-dipyrazinylpyridine (dppy) moiety (L = 4-(2,6-di(pyrazin-2-yl)pyridin-4-yl)-N,N-dimethylaniline). The complex was analyzed both experimentally and computationally using DFT and TD-DFT calculations. The in-situ prepared CuCl2L receptor is employed to selectively recognize sulfide species (detection limit: 82.50 nM) in the presence of other anions in higher concentration (ten equivalents of F, Cl, Br, I, CH3CO2, HCO3, H2PO4, NO3, SO32–, SO42–, S2O32–, CO32–, and HPO42– (10 mM)) in aqueous acetonitrile (2:1 v/v, 10 mM HEPES buffer, pH 7.4) through absorption spectral studies. Furthermore, the receptor is successfully utilized for various real-time detection applications and demonstrated significant intercalative binding interaction with Calf–Thymus DNA (CT-DNA) and good binding interactions with bovine serum albumin (BSA), supported by viscometry and molecular docking studies.

Abstract Image

用于纳摩尔硫化物感应的铜复合物受体及其在 DNA/BSA 结合中的应用
传统的有毒硫化物(S2-、HS- 和 H2S)在各种生物、环境和工业过程中发挥着不可或缺的作用。然而,过量接触这些物质会导致多种慢性疾病。考虑到硫化物识别的重要性,我们以取代的 2,6-二吡嗪基吡啶(dppy)分子(L = 4-(2,6-二(吡嗪-2-基)吡啶-4-基)-N,N-二甲基苯胺)为基础,合成了一种简单的 1:1 Cu(II) L 复合物(CuCl2L 受体),并对其进行了表征。利用 DFT 和 TD-DFT 计算对该配合物进行了实验和计算分析。利用原位制备的 CuCl2L 受体可选择性地识别硫化物(检测限:82.通过吸收光谱研究,在乙腈水溶液(2:1 v/v,10 mM HEPES 缓冲溶液,pH 7.4)中存在其他高浓度阴离子(10 个等量的 F-、Cl-、Br-、I-、CH3CO2-、HCO3-、H2PO4-、NO3-、SO32-、SO42-、S2O32-、CO32- 和 HPO42-(10 mM))的情况下,选择性地识别硫化物物种(检测限:82.此外,该受体还被成功地用于各种实时检测应用,并通过粘度测量和分子对接研究,证明了它与小牛-苔藓 DNA(CT-DNA)之间显著的插层结合相互作用,以及与牛血清白蛋白(BSA)之间良好的结合相互作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
CiteScore
7.90
自引率
7.00%
发文量
580
审稿时长
48 days
期刊介绍: JPPA publishes the results of fundamental studies on all aspects of chemical phenomena induced by interactions between light and molecules/matter of all kinds. All systems capable of being described at the molecular or integrated multimolecular level are appropriate for the journal. This includes all molecular chemical species as well as biomolecular, supramolecular, polymer and other macromolecular systems, as well as solid state photochemistry. In addition, the journal publishes studies of semiconductor and other photoactive organic and inorganic materials, photocatalysis (organic, inorganic, supramolecular and superconductor). The scope includes condensed and gas phase photochemistry, as well as synchrotron radiation chemistry. A broad range of processes and techniques in photochemistry are covered such as light induced energy, electron and proton transfer; nonlinear photochemical behavior; mechanistic investigation of photochemical reactions and identification of the products of photochemical reactions; quantum yield determinations and measurements of rate constants for primary and secondary photochemical processes; steady-state and time-resolved emission, ultrafast spectroscopic methods, single molecule spectroscopy, time resolved X-ray diffraction, luminescence microscopy, and scattering spectroscopy applied to photochemistry. Papers in emerging and applied areas such as luminescent sensors, electroluminescence, solar energy conversion, atmospheric photochemistry, environmental remediation, and related photocatalytic chemistry are also welcome.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信