Integrative metabolomics and proteomics reveal the effect and mechanism of Zi Qi decoction on alleviating liver fibrosis.

IF 3.8 2区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES
Xiaoying Chen, Yifan Wang, Xiaoyun Dou, Jie Wan, Jingwen Zhou, Tianci Li, Jun Yu, Fang Ye
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Abstract

Liver fibrosis is a common progressive liver disease that can cause liver dysfunction and lead to serious complications. Zi Qi decoction (ZQ) is a traditional formulation that exerts pharmacological effects on the treatment of liver fibrosis. However, precise intervention mechanisms remain unclear. The aim of this study was to synergistically harness proteomics and metabolomics techniques to elucidate the specific target of ZQ and its potential mechanism of action. A carbon tetrachloride (CCl4)-induced liver fibrosis mouse model was established. Subsequently, the protective effect of ZQ on liver fibrosis mice was evaluated according to histopathological examination and biochemical indicators. Quantitative proteomics based on data independent acquisition (DIA) and non-targeted metabolomic analyses revealed the pharmacodynamic mechanism of ZQ. In addition, various cellular and molecular assays were used to detect changes in glycolysis levels in LSECs and mouse liver fibrosis models. The study results showed that ZQ significantly alleviated CCl4-induced liver injury and fibrosis in mice. DIA-based quantitative proteomics and non-targeted metabolomics analyses indicated that ZQ treatment downregulated glycolysis-related proteins such as PKM2, PFKP, and HK2, while regulating glycolysis-related metabolites and pathways. In addition, ZQ down-regulated glycolytic activity in mice with liver fibrosis and in LSECs, and inhibited CXCL1 secretion and neutrophil recruitment. ZQ inhibited LSEC glycolysis and mitigated neutrophil infiltration, thereby playing a therapeutic role in liver fibrosis.

综合代谢组学和蛋白质组学揭示子芪汤缓解肝纤维化的作用和机制
肝纤维化是一种常见的渐进性肝病,可引起肝功能障碍,导致严重的并发症。子芪煎剂(ZQ)是一种传统配方,对治疗肝纤维化具有药理作用。然而,确切的干预机制仍不清楚。本研究旨在协同利用蛋白质组学和代谢组学技术,阐明子芪汤的特定靶点及其潜在的作用机制。研究建立了四氯化碳(CCl4)诱导的肝纤维化小鼠模型。随后,根据组织病理学检查和生化指标评估了ZQ对肝纤维化小鼠的保护作用。基于数据独立获取(DIA)的定量蛋白质组学和非靶向代谢组学分析揭示了ZQ的药效学机制。此外,研究人员还利用各种细胞和分子检测方法检测了 LSECs 和小鼠肝纤维化模型中糖酵解水平的变化。研究结果表明,ZQ能明显减轻CCl4诱导的小鼠肝损伤和肝纤维化。基于 DIA 的定量蛋白质组学和非靶向代谢组学分析表明,ZQ 治疗可下调 PKM2、PFKP 和 HK2 等糖酵解相关蛋白,同时调节糖酵解相关代谢物和途径。此外,ZQ 还下调了肝纤维化小鼠和 LSEC 的糖酵解活性,并抑制了 CXCL1 的分泌和中性粒细胞的募集。ZQ 可抑制 LSEC 糖酵解并减轻中性粒细胞浸润,从而在肝纤维化中发挥治疗作用。
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来源期刊
Scientific Reports
Scientific Reports Natural Science Disciplines-
CiteScore
7.50
自引率
4.30%
发文量
19567
审稿时长
3.9 months
期刊介绍: We publish original research from all areas of the natural sciences, psychology, medicine and engineering. You can learn more about what we publish by browsing our specific scientific subject areas below or explore Scientific Reports by browsing all articles and collections. Scientific Reports has a 2-year impact factor: 4.380 (2021), and is the 6th most-cited journal in the world, with more than 540,000 citations in 2020 (Clarivate Analytics, 2021). •Engineering Engineering covers all aspects of engineering, technology, and applied science. It plays a crucial role in the development of technologies to address some of the world''s biggest challenges, helping to save lives and improve the way we live. •Physical sciences Physical sciences are those academic disciplines that aim to uncover the underlying laws of nature — often written in the language of mathematics. It is a collective term for areas of study including astronomy, chemistry, materials science and physics. •Earth and environmental sciences Earth and environmental sciences cover all aspects of Earth and planetary science and broadly encompass solid Earth processes, surface and atmospheric dynamics, Earth system history, climate and climate change, marine and freshwater systems, and ecology. It also considers the interactions between humans and these systems. •Biological sciences Biological sciences encompass all the divisions of natural sciences examining various aspects of vital processes. The concept includes anatomy, physiology, cell biology, biochemistry and biophysics, and covers all organisms from microorganisms, animals to plants. •Health sciences The health sciences study health, disease and healthcare. This field of study aims to develop knowledge, interventions and technology for use in healthcare to improve the treatment of patients.
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