Targeting PrfA from Listeria monocytogenes: A computational drug repurposing approach

Xabier Arias-Moreno
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Abstract

Humans can develop listeriosis by ingestion of foods contaminated with Listeria monocytogenes (L. monocytogenes), an opportunistic gram-positive ubiquitous bacterium. Whilst the non-invasive form of listeriosis may be asymptomatic or cause mild flu-like symptoms, the invasive form of listeriosis is life-threatening and is associated with high hospitalization and fatality rates. Current antibiotic-based therapies are still effective against listeriosis. However, multi-drug resistant L. monocytogenes strains have already been identified, which represents a new risk in the treatment of invasive listeriosis. Therefore, it is increasingly urgent to identify new compounds that do not target the conventional biochemical pathways disrupted by current antibiotics. Positive Regulatory Factor A (PrfA) is a well-studied transcription factor in L. monocytogenes that is responsible for activating a plethora of virulence factors. Targeting virulence factors is a promising strategy that is being considered to combat bacterial infections, hence targeting PrfA is both logical and attractive. In the present computational drug repurposing approach, a complete FDA-approved drugs dataset of more than 700 compounds was virtually screened by docking the drugs against the structure of PrfA. Three of the most promising top-scored FDA drug candidates were then simulated complexed to PrfA. Data from Molecular docking and Molecular Dynamics simulations suggest that Dutasteride binds PrfA, and as a result, may exhibit inhibitory activity against L. monocytogenes. The use of Dutasteride is safe in humans since it has been administered in the treatment of benign prostatic hyperplasia for decades. Its unique chemical scaffold may represent a valuable starting point for the rapid development of disruptive novel listeria-specific drugs that will be soon needed to combat multi-drug resistant L. monocytogenes strains.
以李斯特菌的 PrfA 为靶标:计算药物再利用方法
单核细胞增生李斯特菌(L. monocytogenes)是一种无处不在的机会性革兰氏阳性细菌,人类摄入受其污染的食物可导致李斯特菌病。非侵袭性李斯特菌病可能没有症状或引起轻微的流感样症状,而侵袭性李斯特菌病则会危及生命,住院率和死亡率都很高。目前的抗生素疗法对李斯特菌病仍然有效。然而,目前已经发现了具有多重耐药性的单核细胞增多症菌株,这给侵袭性李斯特菌病的治疗带来了新的风险。因此,寻找不针对被当前抗生素破坏的传统生化途径的新化合物变得越来越迫切。正调控因子 A(PrfA)是单核细胞增多性李氏杆菌中一种研究得很清楚的转录因子,负责激活大量毒力因子。靶向毒力因子是一种很有前景的抗细菌感染策略,因此靶向 PrfA 既合理又有吸引力。在目前的计算药物再利用方法中,通过将药物与 PrfA 的结构对接,对包含 700 多种化合物的完整 FDA 批准药物数据集进行了虚拟筛选。然后模拟了三种最有前途的 FDA 高分候选药物与 PrfA 的复合物。分子对接和分子动力学模拟的数据表明,度他雄胺能与 PrfA 结合,因此可能对单核细胞增多性乳酸杆菌具有抑制活性。使用度他雄胺对人体是安全的,因为几十年来它一直被用于治疗良性前列腺增生症。它独特的化学支架可能是快速开发具有破坏性的新型李斯特菌特异性药物的重要起点,这种药物很快就会被用来对付具有多重耐药性的单核细胞增多症菌株。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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