Unveiling Novel Hybrids Quinazoline/Phenylsulfonylfuroxan Derivatives with Potent Multi-Anticancer Inhibition: DFT and In Silico Approach Combining 2D-QSAR, Molecular Docking, Dynamics Simulations, and ADMET Properties

IF 1.9 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY
Abdelmadjid Guendouzi, Lotfi Belkhiri, Abdelkrim Guendouzi, Giulia Culletta, Marco Tutone
{"title":"Unveiling Novel Hybrids Quinazoline/Phenylsulfonylfuroxan Derivatives with Potent Multi-Anticancer Inhibition: DFT and In Silico Approach Combining 2D-QSAR, Molecular Docking, Dynamics Simulations, and ADMET Properties","authors":"Abdelmadjid Guendouzi,&nbsp;Lotfi Belkhiri,&nbsp;Abdelkrim Guendouzi,&nbsp;Giulia Culletta,&nbsp;Marco Tutone","doi":"10.1002/slct.202404283","DOIUrl":null,"url":null,"abstract":"<p>In this work, the biological activities of 29 novel quinazoline/phenylsulfonylfuroxan derivatives (<b>1a–z</b>, <b>1aa</b>, <b>1ab</b>, <b>2a</b>, <b>2b</b>, <b>2d</b>, and <b>2f</b>) were computationally investigated as potential anti-cancer inhibitors against five cell lines, i.e., H1975, MCF-7, Eca-109, MGC-803, and A549, which are involved in various diseases, including lung, breast, esophageal squamous carcinoma, and gastric cancer. The 2D-QSAR predictive approach, exploiting multiple linear regression (MLR) models and rigorous internal and external cross-validation, showed a correlation factor <i>R</i><sup>2</sup> of range: 0.68−0.82. Moreover, the MLR-derived <i>R</i><sup>2</sup><sub>test</sub> and Y randomization (<i>R</i><sup>2</sup><sub>rand</sub>) values for the five cell lines are higher than 0.60 and less than 0.3, respectively, indicating a strong alignment with the internal and external validation data. New 70 quinazoline hybrids based on the most effective in vivo <b>1q</b> inhibitor were designed, and their pIC<sub>50</sub> activity was predicted. The best-scoring <i>15</i> (N1–N15) compounds were further evaluated using molecular docking and dynamics simulations (100 ns) with the VEGFR-2 kinase target (PDB code: 3U6J). All the data sets accurately predict the strongest binding affinity for the selected (N6, N7, N9, and N11) molecules, as evidenced by the highest docking score, hydrogen bond energy, and significant amino acid steric interactions. Furthermore, the RMS/RMSF/<i>R</i><sub>g</sub> dynamics parameters show that the formed complexes are satisfactorily stable. The ADMET properties indicate that the selected new ligands have shown a promising drug-like profile and can be considered potential candidates for future anti-cancer therapies, with perspective validating their anticancer activity by in vitro and in vivo studies.</p>","PeriodicalId":146,"journal":{"name":"ChemistrySelect","volume":"9 43","pages":""},"PeriodicalIF":1.9000,"publicationDate":"2024-11-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"ChemistrySelect","FirstCategoryId":"92","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/slct.202404283","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0

Abstract

In this work, the biological activities of 29 novel quinazoline/phenylsulfonylfuroxan derivatives (1a–z, 1aa, 1ab, 2a, 2b, 2d, and 2f) were computationally investigated as potential anti-cancer inhibitors against five cell lines, i.e., H1975, MCF-7, Eca-109, MGC-803, and A549, which are involved in various diseases, including lung, breast, esophageal squamous carcinoma, and gastric cancer. The 2D-QSAR predictive approach, exploiting multiple linear regression (MLR) models and rigorous internal and external cross-validation, showed a correlation factor R2 of range: 0.68−0.82. Moreover, the MLR-derived R2test and Y randomization (R2rand) values for the five cell lines are higher than 0.60 and less than 0.3, respectively, indicating a strong alignment with the internal and external validation data. New 70 quinazoline hybrids based on the most effective in vivo 1q inhibitor were designed, and their pIC50 activity was predicted. The best-scoring 15 (N1–N15) compounds were further evaluated using molecular docking and dynamics simulations (100 ns) with the VEGFR-2 kinase target (PDB code: 3U6J). All the data sets accurately predict the strongest binding affinity for the selected (N6, N7, N9, and N11) molecules, as evidenced by the highest docking score, hydrogen bond energy, and significant amino acid steric interactions. Furthermore, the RMS/RMSF/Rg dynamics parameters show that the formed complexes are satisfactorily stable. The ADMET properties indicate that the selected new ligands have shown a promising drug-like profile and can be considered potential candidates for future anti-cancer therapies, with perspective validating their anticancer activity by in vitro and in vivo studies.

Abstract Image

揭示具有强效多抗癌抑制作用的新型喹唑啉/苯磺酰呋喃杂化衍生物:结合二维-QSAR、分子对接、动力学模拟和 ADMET 特性的 DFT 和硅学方法
本研究通过计算研究了29种新型喹唑啉/苯磺酰基呋喃衍生物(1a-z、1aa、1ab、2a、2b、2d和2f)作为潜在的抗癌抑制剂对肺癌、乳腺癌、食管鳞癌和胃癌等多种疾病的五种细胞系(H1975、MCF-7、Eca-109、MGC-803和A549)的生物活性。二维-QSAR 预测方法利用多元线性回归(MLR)模型和严格的内部和外部交叉验证,显示相关系数 R2 在 0.68-0.82 之间:0.68-0.82.此外,五种细胞系的 MLR 派生 R2test 值和 Y 随机化 (R2rand) 值分别高于 0.60 和小于 0.3,表明与内部和外部验证数据非常吻合。根据体内最有效的 1q 抑制剂设计了 70 种新的喹唑啉杂交化合物,并预测了它们的 pIC50 活性。通过与血管内皮生长因子受体-2激酶靶标(PDB 代码:3U6J)进行分子对接和动力学模拟(100 ns),进一步评估了得分最高的 15 个(N1-N15)化合物。所有数据集都准确预测了所选(N6、N7、N9 和 N11)分子的最强结合亲和力,最高的对接得分、氢键能和显著的氨基酸立体相互作用都证明了这一点。此外,RMS/RMSF/Rg 动力学参数表明所形成的复合物具有令人满意的稳定性。ADMET 特性表明,所选的新配体具有良好的类药物特性,可被视为未来抗癌疗法的潜在候选配体,并可通过体外和体内研究验证其抗癌活性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
ChemistrySelect
ChemistrySelect Chemistry-General Chemistry
CiteScore
3.30
自引率
4.80%
发文量
1809
审稿时长
1.6 months
期刊介绍: ChemistrySelect is the latest journal from ChemPubSoc Europe and Wiley-VCH. It offers researchers a quality society-owned journal in which to publish their work in all areas of chemistry. Manuscripts are evaluated by active researchers to ensure they add meaningfully to the scientific literature, and those accepted are processed quickly to ensure rapid online publication.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信