Global and local identifiability analysis of a nonlinear biphasic constitutive model in confined compression.

IF 3.7 2区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES
Journal of The Royal Society Interface Pub Date : 2024-11-01 Epub Date: 2024-11-13 DOI:10.1098/rsif.2024.0415
John M Peloquin, Dawn M Elliott
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引用次数: 0

Abstract

Application of biomechanical models relies on model parameters estimated from experimental data. Parameter non-identifiability, when the same model output can be produced by many sets of parameter values, introduces severe errors yet has received relatively little attention in biomechanics and is subtle enough to remain unnoticed in the absence of deliberate verification. The present work develops a global identifiability analysis method in which cluster analysis and singular value decomposition are applied to vectors of parameter-output variable correlation coefficients. This method provides a visual representation of which specific experimental design elements are beneficial or harmful in terms of parameter identifiability, supporting the correction of deficiencies in the test protocol prior to testing physical specimens. The method was applied to a representative nonlinear biphasic model for cartilaginous tissue, demonstrating that confined compression data does not provide identifiability for the biphasic model parameters. This result was confirmed by two independent analyses: local analysis of the Hessian of a sum-of-squares error cost function and observation of the behaviour of two optimization algorithms. Therefore, confined compression data are insufficient for the calibration of general-purpose biphasic models. Identifiability analysis by these or other methods is strongly recommended when planning future experiments.

约束压缩非线性双相构造模型的全局和局部可识别性分析
生物力学模型的应用依赖于从实验数据中估算出的模型参数。当多组参数值可以产生相同的模型输出结果时,参数的不可识别性就会带来严重的误差,但在生物力学中却很少受到关注,而且在没有刻意验证的情况下,这种不可识别性也会被忽视。本研究开发了一种全局可识别性分析方法,将聚类分析和奇异值分解应用于参数-输出变量相关系数向量。该方法可直观显示哪些特定实验设计元素对参数可识别性有利或有害,从而支持在测试物理试样之前纠正测试方案中的不足之处。将该方法应用于软骨组织的代表性非线性双相模型,结果表明密闭压缩数据无法提供双相模型参数的可识别性。这一结果得到了两项独立分析的证实:对平方总和误差成本函数的赫塞斯局部分析,以及对两种优化算法行为的观察。因此,密闭压缩数据不足以校准通用双相模型。在规划未来实验时,强烈建议使用这些方法或其他方法进行可识别性分析。
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来源期刊
Journal of The Royal Society Interface
Journal of The Royal Society Interface 综合性期刊-综合性期刊
CiteScore
7.10
自引率
2.60%
发文量
234
审稿时长
2.5 months
期刊介绍: J. R. Soc. Interface welcomes articles of high quality research at the interface of the physical and life sciences. It provides a high-quality forum to publish rapidly and interact across this boundary in two main ways: J. R. Soc. Interface publishes research applying chemistry, engineering, materials science, mathematics and physics to the biological and medical sciences; it also highlights discoveries in the life sciences of relevance to the physical sciences. Both sides of the interface are considered equally and it is one of the only journals to cover this exciting new territory. J. R. Soc. Interface welcomes contributions on a diverse range of topics, including but not limited to; biocomplexity, bioengineering, bioinformatics, biomaterials, biomechanics, bionanoscience, biophysics, chemical biology, computer science (as applied to the life sciences), medical physics, synthetic biology, systems biology, theoretical biology and tissue engineering.
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