Multi-omics analysis of the biological function of the VEGF family in colon adenocarcinoma

IF 3.9 4区 生物学 Q1 GENETICS & HEREDITY
Jianqiao Yang, Chen Li, Zhu Wang, Kewei Jiang
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引用次数: 0

Abstract

The vascular endothelial growth factor (VEGF) family plays a crucial role in cancer progression, but the prognostic significance and biological functions of VEGF family members in colon adenocarcinoma (COAD) remain unclear. Using data from The Cancer Genome Atlas, Gene Expression Omnibus, Gene Set Cancer Analysis, cBioPortal, GeneMANIA, String, MethSurv and starBase database, we identified vascular endothelial growth factor B (VEGFB) as a key gene associated with COAD prognosis, with its abnormal expression linked to methylation dysregulation. In vitro experiments confirmed VEGFB expression was significantly higher in colon cancer tissues compared to normal tissues, as shown by Real-time quantitative PCR and immunohistochemistry. Cell Counting Kit-8 and colony formation assay showed that decreased VEGFB expression in SW480 cells resulted in decreased cell viability and proliferation ability. Scratch assay showed that VEGFB downregulation impaired SW480 cell migration. In addition, our research suggests that VEGFB not only promotes angiogenesis but is also involved in the tumor microenvironment and immune regulation. The SHNG17-miR-375-VEGFB regulatory axis provides a potential therapeutic target for COAD, highlighting VEGFB’s role in immune activation during anti-angiogenic therapy and potential reversal of drug resistance.

结肠腺癌中血管内皮生长因子家族生物功能的多组学分析
血管内皮生长因子(VEGF)家族在癌症进展中起着至关重要的作用,但VEGF家族成员在结肠腺癌(COAD)中的预后意义和生物学功能仍不清楚。利用癌症基因组图谱、基因表达总库、基因组癌症分析、cBioPortal、GeneMANIA、String、MethSurv 和 starBase 数据库中的数据,我们发现血管内皮生长因子 B(VEGFB)是与 COAD 预后相关的关键基因,其异常表达与甲基化失调有关。体外实验证实,与正常组织相比,结肠癌组织中血管内皮生长因子 B 的表达明显更高,这一点已通过实时定量 PCR 和免疫组化得到证实。细胞计数试剂盒-8 和集落形成试验表明,SW480 细胞中 VEGFB 表达减少会导致细胞活力和增殖能力下降。划痕实验表明,VEGFB 下调会影响 SW480 细胞的迁移。此外,我们的研究表明,VEGFB 不仅促进血管生成,还参与肿瘤微环境和免疫调节。SHNG17-miR-375-VEGFB调节轴为COAD提供了一个潜在的治疗靶点,凸显了VEGFB在抗血管生成治疗过程中的免疫激活作用以及逆转耐药性的潜力。
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来源期刊
CiteScore
3.50
自引率
3.40%
发文量
92
审稿时长
2 months
期刊介绍: Functional & Integrative Genomics is devoted to large-scale studies of genomes and their functions, including systems analyses of biological processes. The journal will provide the research community an integrated platform where researchers can share, review and discuss their findings on important biological questions that will ultimately enable us to answer the fundamental question: How do genomes work?
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