From synthetic communities to synthetic ecosystems: exploring causalities in plant-microbe-environment interactions.

IF 9.4 1区 生物学 Q1 Agricultural and Biological Sciences
New Phytologist Pub Date : 2024-11-05 DOI:10.1111/nph.20250
Guillaume Chesneau, Johannes Herpell, Rubén Garrido-Oter, Stéphane Hacquard
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引用次数: 0

Abstract

The plant microbiota research field has rapidly shifted from efforts aimed at gaining a descriptive understanding of microbiota composition to a focus on acquiring mechanistic insights into microbiota functions and assembly rules. This evolution was driven by our ability to establish comprehensive collections of plant-associated microbes and to reconstruct meaningful microbial synthetic communities (SynComs). We argue that this powerful deconstruction-reconstruction strategy can be used to reconstitute increasingly complex synthetic ecosystems (SynEcos) and mechanistically understand high-level biological organization. The transitioning from simple to more advanced, fully tractable and programmable gnotobiotic SynEcos is ongoing and aims at rationally simplifying natural ecosystems by engineering them. Such reconstitution ecology approaches represent an untapped strategy for bridging the gap between ecology and functional biology and for unraveling plant-microbiota-environment mechanisms that modulate ecosystem health, assembly, and functioning.

从合成群落到合成生态系统:探索植物-微生物-环境相互作用的因果关系。
植物微生物区系研究领域已迅速从旨在获得对微生物区系组成的描述性理解,转变为侧重于从机理上深入了解微生物区系的功能和组装规则。我们有能力全面收集植物相关微生物,并重建有意义的微生物合成群落(SynComs),从而推动了这一演变。我们认为,这种强大的解构-重建策略可用于重建日益复杂的合成生态系统(SynEcos),并从机理上理解高级生物组织。从简单到更先进、完全可控和可编程的非生物合成生态系统的过渡正在进行中,其目的是通过工程设计合理地简化自然生态系统。这种重组生态学方法是一种尚未开发的策略,可弥合生态学与功能生物学之间的差距,并揭示植物-微生物群-环境调节生态系统健康、组合和功能的机制。
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来源期刊
New Phytologist
New Phytologist PLANT SCIENCES-
CiteScore
17.60
自引率
5.30%
发文量
728
审稿时长
1 months
期刊介绍: New Phytologist is a leading publication that showcases exceptional and groundbreaking research in plant science and its practical applications. With a focus on five distinct sections - Physiology & Development, Environment, Interaction, Evolution, and Transformative Plant Biotechnology - the journal covers a wide array of topics ranging from cellular processes to the impact of global environmental changes. We encourage the use of interdisciplinary approaches, and our content is structured to reflect this. Our journal acknowledges the diverse techniques employed in plant science, including molecular and cell biology, functional genomics, modeling, and system-based approaches, across various subfields.
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