Deciphering the topological landscape of glioma using a network theory framework.

IF 3.8 2区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES
Mengchao Yao, Yang Su, Ruiqi Xiong, Xile Zhang, Xiaomei Zhu, Yong-Cong Chen, Ping Ao
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Abstract

Glioma stem cells have been recognized as key players in glioma recurrence and therapeutic resistance, presenting a promising target for novel treatments. However, the limited understanding of the role glioma stem cells play in the glioma hierarchy has drawn controversy and hindered research translation into therapies. Despite significant advances in our understanding of gene regulatory networks, the dynamics of these networks and their implications for glioma remain elusive. This study employs a systemic theoretical perspective to integrate experimental knowledge into a core endogenous network model for glioma, thereby elucidating its energy landscape through network dynamics computation. The model identifies two stable states corresponding to astrocytic-like and oligodendrocytic-like tumor cells, connected by a transition state with the feature of high stemness, which serves as one of the energy barriers between astrocytic-like and oligodendrocytic-like states, indicating the instability of glioma stem cells in vivo. We also obtained various stable states further supporting glioma's multicellular origins and uncovered a group of transition states that could potentially induce tumor heterogeneity and therapeutic resistance. This research proposes that the transition states linking both glioma stable states are central to glioma heterogeneity and therapy resistance. Our approach may contribute to the advancement of glioma therapy by offering a novel perspective on the complex landscape of glioma biology.

利用网络理论框架解密胶质瘤的拓扑结构。
胶质瘤干细胞已被认为是胶质瘤复发和治疗耐药性的关键因素,是新型治疗方法的有望靶点。然而,人们对胶质瘤干细胞在胶质瘤层次结构中所起作用的了解有限,这引起了争议,并阻碍了将研究成果转化为疗法。尽管我们对基因调控网络的了解取得了重大进展,但这些网络的动态及其对胶质瘤的影响仍然难以捉摸。本研究采用系统理论视角,将实验知识整合到胶质瘤的核心内源网络模型中,从而通过网络动力学计算阐明其能量景观。该模型确定了两种稳定状态,分别对应星形胶质细胞样和少突胶质细胞样肿瘤细胞,由一个具有高干性特征的过渡状态连接,该过渡状态是星形胶质细胞样和少突胶质细胞样状态之间的能量壁垒之一,表明了胶质瘤干细胞在体内的不稳定性。我们还获得了各种稳定状态,进一步证实了胶质瘤的多细胞起源,并发现了一组可能诱发肿瘤异质性和治疗耐药性的过渡状态。这项研究提出,连接两种胶质瘤稳定状态的过渡状态是胶质瘤异质性和耐药性的核心。我们的方法为胶质瘤生物学的复杂图景提供了一个新的视角,可能有助于胶质瘤治疗的进步。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Scientific Reports
Scientific Reports Natural Science Disciplines-
CiteScore
7.50
自引率
4.30%
发文量
19567
审稿时长
3.9 months
期刊介绍: We publish original research from all areas of the natural sciences, psychology, medicine and engineering. You can learn more about what we publish by browsing our specific scientific subject areas below or explore Scientific Reports by browsing all articles and collections. Scientific Reports has a 2-year impact factor: 4.380 (2021), and is the 6th most-cited journal in the world, with more than 540,000 citations in 2020 (Clarivate Analytics, 2021). •Engineering Engineering covers all aspects of engineering, technology, and applied science. It plays a crucial role in the development of technologies to address some of the world''s biggest challenges, helping to save lives and improve the way we live. •Physical sciences Physical sciences are those academic disciplines that aim to uncover the underlying laws of nature — often written in the language of mathematics. It is a collective term for areas of study including astronomy, chemistry, materials science and physics. •Earth and environmental sciences Earth and environmental sciences cover all aspects of Earth and planetary science and broadly encompass solid Earth processes, surface and atmospheric dynamics, Earth system history, climate and climate change, marine and freshwater systems, and ecology. It also considers the interactions between humans and these systems. •Biological sciences Biological sciences encompass all the divisions of natural sciences examining various aspects of vital processes. The concept includes anatomy, physiology, cell biology, biochemistry and biophysics, and covers all organisms from microorganisms, animals to plants. •Health sciences The health sciences study health, disease and healthcare. This field of study aims to develop knowledge, interventions and technology for use in healthcare to improve the treatment of patients.
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