Relationships Between Polymorphisms in HLA-G 3'UTR Region and COVID-19 Disease Severity.

IF 2.1 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Ahmed Alyami, Fawziya B Barnawi, Steve Christmas, Yusra Alyafee, Maaweya Awadalla, Zaid Al-Bayati, Ahmad A Alshehri, Ahmed M Saif, Lamjed Mansour
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引用次数: 0

Abstract

The objective of this study is to investigate the the relationships between HLA-G gene variants and sHLA-G with susceptibility to SARS-CoV-2 infection. In this case-control study, 65 Patients with COVID-19 were and 67 healthy controls were genotyped for their main functional polymorphisms namely, the 14-bp Ins/Del (rs371194629), +3003C/T (rs1707), +3010C/G (rs1710), +3027A/C (rs17179101), +3035C/T (rs17179108), +3142C/G (rs1063320), +3187A/G (rs9380142) and +3196C/G (rs1610696) in the exon 8 of the 3' untranslated regions (3' UTRs) using sanger sequencing method. Associations were assessed for five inheritance models (codominant, dominant, recessive, over-dominant and log-additive). Moreover, the levels of plasma soluble HLA-G (sHLA-G) were explored using ELISA method. Our results revealed that the 14-bp INS/DEL polymorphism was strongly associated with COVID-19 symptoms development for almost all tested inheritance models (p < 0.001). Inversely, the (+3196C/G) polymorphism exhibited a protective effect against COVID-19. In addition, three haplotypes; UTR-1, UTR-3, and UTR-5 were found associated with COVID-19 symptoms (p < 0.05), The level of HLA-G in the serum was significantly higher in COVID-19 individuals than in healthy individuals (p < 0.001).These findings suggest that HLA-G gene polymorphisms in the regulatory 3'UTR region of the HLA-G gene may influence the host immune response to SARS-CoV-2 infection. A deeper comprehension of the functional effect of these associated polymorphisms could be useful in identifying high-risk individuals and in developing adaptive treatments for patients.

HLA-G 3'UTR 区域多态性与 COVID-19 疾病严重程度的关系
本研究旨在探讨 HLA-G 基因变异和 sHLA-G 与 SARS-CoV-2 感染易感性之间的关系。在这项病例对照研究中,对 65 名 COVID-19 患者和 67 名健康对照者进行了主要功能多态性基因分型,即 14-bp Ins/Del (rs371194629), +3003C/T (rs1707), +3010C/G (rs1710)、 采用桑格测序法对 3' 非翻译区(3' UTR)第 8 外显子中的 +3027A/C (rs17179101)、+3035C/T (rs179108)、+3142C/G (rs1063320)、+3187A/G (rs9380142) 和 +3196C/G (rs1610696) 进行测序。对五种遗传模式(共显性、显性、隐性、过显性和对数相加)的相关性进行了评估。此外,还使用 ELISA 方法检测了血浆可溶性 HLA-G(sHLA-G)的水平。我们的研究结果表明,在几乎所有测试的遗传模式中,14-bp INS/DEL 多态性与 COVID-19 症状的发生密切相关(p
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来源期刊
Biochemical Genetics
Biochemical Genetics 生物-生化与分子生物学
CiteScore
3.90
自引率
0.00%
发文量
133
审稿时长
4.8 months
期刊介绍: Biochemical Genetics welcomes original manuscripts that address and test clear scientific hypotheses, are directed to a broad scientific audience, and clearly contribute to the advancement of the field through the use of sound sampling or experimental design, reliable analytical methodologies and robust statistical analyses. Although studies focusing on particular regions and target organisms are welcome, it is not the journal’s goal to publish essentially descriptive studies that provide results with narrow applicability, or are based on very small samples or pseudoreplication. Rather, Biochemical Genetics welcomes review articles that go beyond summarizing previous publications and create added value through the systematic analysis and critique of the current state of knowledge or by conducting meta-analyses. Methodological articles are also within the scope of Biological Genetics, particularly when new laboratory techniques or computational approaches are fully described and thoroughly compared with the existing benchmark methods. Biochemical Genetics welcomes articles on the following topics: Genomics; Proteomics; Population genetics; Phylogenetics; Metagenomics; Microbial genetics; Genetics and evolution of wild and cultivated plants; Animal genetics and evolution; Human genetics and evolution; Genetic disorders; Genetic markers of diseases; Gene technology and therapy; Experimental and analytical methods; Statistical and computational methods.
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