Synthesis, Biological Evaluation, Molecular Docking Studies and ADMET Prediction of Oxindole-Based Hybrids for the Treatment of Tuberculosis.

Vaishali Pavalbhai Patel, Rati Kailash Prasad Tripathi, Snigdha Das Mandal
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Abstract

Introduction: With a projected mortality toll of 1.4 million in 2019, tuberculosis (TB) continues to be a significant public health concern around the world. Studies of novel treatments are required due to decreased bioavailability, increased toxicity, increased side effects, and resistance of several first- and second-line TB therapies, including isoniazid and ethionamide.

Methods: This study reports the synthesis of oxindole-based hybrids as potent InhA inhibitors targeting Mycobacterium tuberculosis. The synthesized compounds (5a-5e and 8a-8c) were evaluated for their anti-mycobacterial activity against Mycobacterium tuberculosis and nontuberculous mycobacteria (NTMs), viz. M. abscessus (ATCC 19977), M. fortuitum (ATCC 6841), and M. chelonae (ATCC 35752) using the Microplate Alamar Blue Assay (MABA). Molecular docking studies were performed using AutoDock Vina to explore the binding interactions of these compounds with the InhA enzyme (PDB: 2NSD). Additionally, biochemical and histopathological studies were conducted to assess the hepatotoxicity of the lead compounds. Insilico molecular properties and ADMET properties of the synthesized compounds were predicted using SwissADME and Deep-PK online tools to assess their drug-likeness.

Results: Among the tested compounds, 8b exhibited significant anti-mycobacterial activity with a minimum inhibitory concentration (MIC = 1 μg/mL) comparable to the reference drug ethambutol. Further, the compound demonstrated a binding affinity and orientation similar to the reference inhibitor 4PI, indicating its potential as a potent InhA inhibitor, and was found to be stabilized within the binding pocket of InhA through H-bonding, hydrophobic and van der Waal's interactions. Besides, the compounds hepatotoxicity assessment studies depicted that 8b showed no significant liver dysfunction or damage to liver tissues. Additionally, 8b adhered to Lipinski's rule of five and Veber's rule, displaying favourable pharmacokinetic and drug-like properties, including high human intestinal absorption, distribution, and acceptable metabolic stability and excretion.

Conclusion: Compound 8b emerged as a promising candidate for further optimization and development as a therapeutic agent for tuberculosis, offering a new avenue for tackling tuberculosis.

用于治疗结核病的吲哚类混合物的合成、生物学评价、分子对接研究和 ADMET 预测。
导言:预计到 2019 年,结核病(TB)的死亡人数将达到 140 万,它仍然是全世界重大的公共卫生问题。由于生物利用度降低、毒性增加、副作用增加以及包括异烟肼和乙硫酰胺在内的几种一线和二线结核病疗法的耐药性,需要对新型疗法进行研究:本研究报告了针对结核分枝杆菌的强效 InhA 抑制剂--吲哚类杂交化合物的合成。使用微孔板氨蓝分析法(MABA)评估了合成的化合物(5a-5e 和 8a-8c)对结核分枝杆菌和非结核分枝杆菌(NTMs),即脓肿分枝杆菌(ATCC 19977)、M. fortuitum(ATCC 6841)和 M. chelonae(ATCC 35752)的抗分枝杆菌活性。使用 AutoDock Vina 进行了分子对接研究,以探索这些化合物与 InhA 酶(PDB:2NSD)的结合相互作用。此外,还进行了生化和组织病理学研究,以评估先导化合物的肝毒性。使用 SwissADME 和 Deep-PK 在线工具预测了合成化合物的分子内性质和 ADMET 性质,以评估其药物亲和性:结果:在测试的化合物中,8b 具有显著的抗霉菌活性,其最低抑菌浓度(MIC = 1 μg/mL)与参考药物乙胺丁醇相当。此外,该化合物显示出与参考抑制剂 4PI 相似的结合亲和力和取向,表明它有可能成为一种有效的 InhA 抑制剂,并通过 H 键、疏水和范德华相互作用被稳定在 InhA 的结合袋中。此外,化合物的肝毒性评估研究表明,8b 没有显示出明显的肝功能障碍或肝组织损伤。此外,8b 还符合利宾斯基五则和韦伯五则,显示出良好的药代动力学和类药物特性,包括较高的人体肠道吸收率、分布率以及可接受的代谢稳定性和排泄率:结论:化合物 8b 是一种有希望进一步优化和开发的结核病治疗剂,为解决结核病问题提供了一条新途径。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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