Population structure of Desmophyllum pertusum found along the United States eastern continental margin.

IF 1.6 Q2 MULTIDISCIPLINARY SCIENCES
Alexis M Weinnig, Aaron W Aunins, Veronica Salamone, Andrea M Quattrini, Martha S Nizinski, Cheryl L Morrison
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引用次数: 0

Abstract

Objective: The connectivity and genetic structuring of populations throughout a region influence a species' resilience and probability of recovery from anthropogenic impacts. By gaining a comprehensive understanding of population connectivity, more effective management can be prioritized. To assess the connectivity and population genetic structure of a common cold-water coral species, Desmophyllum pertusum (Lophelia pertusa), we performed Restriction-site Associated DNA Sequencing (RADseq) on individuals from nine sites ranging from submarine canyons off New England to the southeastern coast of the United States (SEUS) and the Gulf of Mexico (GOM). Fifty-seven individuals and 3,180 single-nucleotide polymorphisms (SNPs) were used to assess genetic differentiation.

Results: High connectivity exists among populations along the SEUS, yet these populations were differentiated from those to the north off New England and in Norfolk Canyon along the North Atlantic coast of the United States, as well as those in the GOM. Interestingly, Norfolk Canyon, located just north of North Carolina, and GOM populations exhibited low levels of genetic differentiation, corroborating previous microsatellite analyses and signifying gene flow between these populations. Increasing sample sizes from existing populations and including additional sampling sites over a larger geographic range would help define potential source populations and reveal fine-scale connectivity patterns among D. pertusum populations.

美国东部大陆边缘发现的 Desmophyllum pertusum 的种群结构。
目标:整个地区种群的连通性和遗传结构会影响物种的恢复能力以及从人为影响中恢复的概率。通过全面了解种群的连通性,可以确定更有效的管理优先次序。为了评估一种常见冷水珊瑚物种--Desmophyllum pertusum(Lophelia pertusa)--的连通性和种群遗传结构,我们对来自新英格兰海底峡谷、美国东南海岸(SEUS)和墨西哥湾(GOM)等九个地点的个体进行了限制位点相关 DNA 测序(RADseq)。57 个个体和 3,180 个单核苷酸多态性(SNPs)被用于评估遗传分化:结果:东南大西洋沿岸的种群之间存在高度的连通性,但这些种群与新英格兰以北和美国北大西洋沿岸诺福克峡谷的种群以及墨西哥湾的种群存在差异。有趣的是,位于北卡罗来纳州北部的诺福克峡谷和 GOM 的种群表现出较低的遗传分化水平,这与之前的微卫星分析结果相吻合,表明这些种群之间存在基因流动。增加现有种群的样本量,并在更大的地理范围内增加采样点,将有助于确定潜在的来源种群,并揭示 D. pertusum 种群之间的微尺度连接模式。
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来源期刊
BMC Research Notes
BMC Research Notes Biochemistry, Genetics and Molecular Biology-Biochemistry, Genetics and Molecular Biology (all)
CiteScore
3.60
自引率
0.00%
发文量
363
审稿时长
15 weeks
期刊介绍: BMC Research Notes publishes scientifically valid research outputs that cannot be considered as full research or methodology articles. We support the research community across all scientific and clinical disciplines by providing an open access forum for sharing data and useful information; this includes, but is not limited to, updates to previous work, additions to established methods, short publications, null results, research proposals and data management plans.
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