Extrapolating Sentinel Surveillance Information to Estimate National COVID Hospital Admission Rates: A Bayesian Modeling Approach

IF 4.3 4区 医学 Q1 INFECTIOUS DISEASES
Owen Devine, Huong Pham, Betsy Gunnels, Heather E. Reese, Molly Steele, Alexia Couture, Danielle Iuliano, Darpun Sachdev, Nisha B. Alden, James Meek, Lucy Witt, Patricia A. Ryan, Libby Reeg, Ruth Lynfield, Susan L. Ropp, Grant Barney, Brenda L. Tesini, Eli Shiltz, Melissa Sutton, H. Keipp Talbot, Isabella Reyes, Fiona P. Havers
{"title":"Extrapolating Sentinel Surveillance Information to Estimate National COVID Hospital Admission Rates: A Bayesian Modeling Approach","authors":"Owen Devine,&nbsp;Huong Pham,&nbsp;Betsy Gunnels,&nbsp;Heather E. Reese,&nbsp;Molly Steele,&nbsp;Alexia Couture,&nbsp;Danielle Iuliano,&nbsp;Darpun Sachdev,&nbsp;Nisha B. Alden,&nbsp;James Meek,&nbsp;Lucy Witt,&nbsp;Patricia A. Ryan,&nbsp;Libby Reeg,&nbsp;Ruth Lynfield,&nbsp;Susan L. Ropp,&nbsp;Grant Barney,&nbsp;Brenda L. Tesini,&nbsp;Eli Shiltz,&nbsp;Melissa Sutton,&nbsp;H. Keipp Talbot,&nbsp;Isabella Reyes,&nbsp;Fiona P. Havers","doi":"10.1111/irv.70026","DOIUrl":null,"url":null,"abstract":"<p>The COVID-19-Associated Hospitalization Surveillance Network (COVID-NET) was established in March 2020 to monitor trends in hospitalizations associated with SARS-CoV-2 infection. COVID-NET is a geographically diverse population-based surveillance system for laboratory-confirmed COVID-19-associated hospitalizations with a combined catchment area covering approximately 10% of the US population. Data collected in COVID-NET includes monthly counts of hospitalizations for persons with confirmed SARS-CoV-2 infection who reside within the defined catchment area. A Bayesian modeling approach is proposed to estimate US national COVID-associated hospital admission rates based on information reported in the COVID-NET system. A key component of the approach is the ability to estimate uncertainty resulting from extrapolation of hospitalization rates observed within COVID-NET to the US population. In addition, the proposed model enables estimation of other contributors to uncertainty including temporal dependence among reported COVID-NET admission counts, the impact of unmeasured site-specific factors, and the frequency and accuracy of testing for SARS-CoV-2 infection. Based on the proposed model, an estimated 6.3 million (95% uncertainty interval (UI) 5.4–7.3 million) COVID-19-associated hospital admissions occurred in the United States from September 2020 through December 2023. Between April 2020 and December 2023, model-based monthly admission rate estimates ranged from a minimum of 1 per 10,000 population (95% UI 0.7–1.2) in June of 2023 to a highest monthly level of 16 per 10,000 (95% UI 13–19) in January 2022.</p>","PeriodicalId":13544,"journal":{"name":"Influenza and Other Respiratory Viruses","volume":"18 10","pages":""},"PeriodicalIF":4.3000,"publicationDate":"2024-10-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11497105/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Influenza and Other Respiratory Viruses","FirstCategoryId":"3","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1111/irv.70026","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"INFECTIOUS DISEASES","Score":null,"Total":0}
引用次数: 0

Abstract

The COVID-19-Associated Hospitalization Surveillance Network (COVID-NET) was established in March 2020 to monitor trends in hospitalizations associated with SARS-CoV-2 infection. COVID-NET is a geographically diverse population-based surveillance system for laboratory-confirmed COVID-19-associated hospitalizations with a combined catchment area covering approximately 10% of the US population. Data collected in COVID-NET includes monthly counts of hospitalizations for persons with confirmed SARS-CoV-2 infection who reside within the defined catchment area. A Bayesian modeling approach is proposed to estimate US national COVID-associated hospital admission rates based on information reported in the COVID-NET system. A key component of the approach is the ability to estimate uncertainty resulting from extrapolation of hospitalization rates observed within COVID-NET to the US population. In addition, the proposed model enables estimation of other contributors to uncertainty including temporal dependence among reported COVID-NET admission counts, the impact of unmeasured site-specific factors, and the frequency and accuracy of testing for SARS-CoV-2 infection. Based on the proposed model, an estimated 6.3 million (95% uncertainty interval (UI) 5.4–7.3 million) COVID-19-associated hospital admissions occurred in the United States from September 2020 through December 2023. Between April 2020 and December 2023, model-based monthly admission rate estimates ranged from a minimum of 1 per 10,000 population (95% UI 0.7–1.2) in June of 2023 to a highest monthly level of 16 per 10,000 (95% UI 13–19) in January 2022.

Abstract Image

推断哨点监测信息以估算全国 COVID 住院率:贝叶斯建模方法。
COVID-19 相关住院监测网络 (COVID-NET) 成立于 2020 年 3 月,旨在监测与 SARS-CoV-2 感染相关的住院趋势。COVID-NET 是一个基于地域的人口监测系统,监测实验室确诊的 COVID-19 相关住院病例,其覆盖范围约占美国人口的 10%。COVID-NET 收集的数据包括居住在规定覆盖区内的确诊 SARS-CoV-2 感染者的每月住院人数。根据 COVID-NET 系统报告的信息,我们提出了一种贝叶斯建模方法来估算美国全国 COVID 相关住院率。该方法的一个关键组成部分是能够估算将 COVID-NET 中观察到的住院率外推法应用于美国人口所产生的不确定性。此外,所提议的模型还能估算其他不确定性因素,包括 COVID-NET 入院人数报告的时间依赖性、未测量的特定地点因素的影响以及 SARS-CoV-2 感染检测的频率和准确性。根据所提出的模型,2020 年 9 月至 2023 年 12 月期间,美国估计有 630 万例(95% 不确定区间 (UI) 540-730 万例)与 COVID-19 相关的入院病例。2020 年 4 月至 2023 年 12 月期间,基于模型的月入院率估计值从 2023 年 6 月的最低每万人 1 例(95% UI 0.7-1.2)到 2022 年 1 月的最高每月每万人 16 例(95% UI 13-19)不等。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
CiteScore
7.20
自引率
4.50%
发文量
120
审稿时长
6-12 weeks
期刊介绍: Influenza and Other Respiratory Viruses is the official journal of the International Society of Influenza and Other Respiratory Virus Diseases - an independent scientific professional society - dedicated to promoting the prevention, detection, treatment, and control of influenza and other respiratory virus diseases. Influenza and Other Respiratory Viruses is an Open Access journal. Copyright on any research article published by Influenza and Other Respiratory Viruses is retained by the author(s). Authors grant Wiley a license to publish the article and identify itself as the original publisher. Authors also grant any third party the right to use the article freely as long as its integrity is maintained and its original authors, citation details and publisher are identified.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信