Tetraarylpyrrolo[3,2-b]pyrrole-BODIPY dyad: a molecular rotor for FRET-based viscosity sensing.

IF 3.8 3区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY
Frontiers in Chemistry Pub Date : 2024-10-10 eCollection Date: 2024-01-01 DOI:10.3389/fchem.2024.1473769
Richa Agrawal, Sudip Gorai, Sunil Suresh Yadav, Amey P Wadawale, Soumyaditya Mula
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引用次数: 0

Abstract

With the aim to develop a FRET-based viscosity sensor, two dyad molecules, 4 and 5, comprising tetraarylpyrrolo[3,2-b]pyrrole (TAPP) (donor) and naked boron-dipyrromethene (BODIPY) dyes (acceptor), were designed. Dyads were synthesized via acid-catalyzed multicomponent reactions followed by Sonogashira coupling. In both dyads, the BODIPY and TAPP moieties are linked through phenylethynyl groups, which allow free rotation of the BODIPY dyes; that is, they can act as molecular rotors. This was supported by X-ray crystallographic and DFT-optimized structures. Spectroscopic studies also confirmed the presence of both TAPP and BODIPY dyes in dyads with no electronic interactions that are suitable for fluorescence resonance energy transfer (FRET). Very high energy transfer efficiency (ETE >99%) from the donor TAPP moiety to the acceptor BODIPY moiety on excitation at the TAPP part was observed. However, due to the non-fluorescent nature of naked BODIPY dyes, no fluorescence emission was observed from the BODIPY moiety in both dyads. With increasing solvent viscosities, emission from the BODIPY moieties increases due to the restricted rotation of the BODIPY moieties. Plotting the logarithms of the fluorescent intensity of dyad 5 and the viscosity of the solution showed a good linear correlation obeying a Förster-Hoffmann equation. Non-fluorescent dyad 5 in methanol became greenish-yellow fluorescent in a methanol/glycerol (1:1) solvent. Furthermore, with an increase in the temperature of the methanol/glycerol (1:1) system, as the viscosity decreases, the fluorescence also starts decreasing. Thus, dyad 5 is capable of sensing the viscosity of the medium via a FRET-based "Off-On" mechanism. This type of viscosity sensor with a very large pseudo-Stokes shift and increased sensitivity will be useful for advancing chemo-bio sensing and imaging applications.

四芳基吡咯并[3,2-b]吡咯-BODIPY 二元化合物:基于 FRET 的粘度传感分子转子。
为了开发一种基于 FRET 的粘度传感器,我们设计了由四芳基吡咯并[3,2-b]吡咯(TAPP)(供体)和裸硼-二吡咯并[3,2-b]吡咯(BODIPY)染料(受体)组成的两个二元分子 4 和 5。染料是通过酸催化多组分反应,然后通过 Sonogashira 偶联合成的。在这两种二元化合物中,BODIPY 和 TAPP 分子通过苯乙炔基连接,这使得 BODIPY 染料可以自由旋转;也就是说,它们可以作为分子旋转体。这一点得到了 X 射线晶体学和 DFT 优化结构的支持。光谱研究也证实了 TAPP 和 BODIPY 染料的二元性,它们之间没有电子相互作用,适合荧光共振能量转移(FRET)。在 TAPP 部分受到激发时,供体 TAPP 分子向受体 BODIPY 分子的能量传递效率非常高(ETE >99%)。然而,由于裸 BODIPY 染料的非荧光性质,在这两种染料中均未观察到 BODIPY 分子发出荧光。随着溶剂粘度的增加,由于 BODIPY 分子的旋转受限,BODIPY 分子的发射会增加。将染料 5 的荧光强度的对数与溶液的粘度绘制成图,显示出良好的线性关系,符合 Förster-Hoffmann 方程。在甲醇中无荧光的染料 5 在甲醇/甘油(1:1)溶剂中变成了黄绿色荧光。此外,随着甲醇/甘油(1:1)体系温度的升高,粘度降低,荧光也开始减弱。因此,染料 5 能够通过基于 FRET 的 "关-开 "机制来感知介质的粘度。这种粘度传感器具有非常大的伪斯托克斯位移和更高的灵敏度,将有助于推进化学生物传感和成像应用。
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来源期刊
Frontiers in Chemistry
Frontiers in Chemistry Chemistry-General Chemistry
CiteScore
8.50
自引率
3.60%
发文量
1540
审稿时长
12 weeks
期刊介绍: Frontiers in Chemistry is a high visiblity and quality journal, publishing rigorously peer-reviewed research across the chemical sciences. Field Chief Editor Steve Suib at the University of Connecticut is supported by an outstanding Editorial Board of international researchers. This multidisciplinary open-access journal is at the forefront of disseminating and communicating scientific knowledge and impactful discoveries to academics, industry leaders and the public worldwide. Chemistry is a branch of science that is linked to all other main fields of research. The omnipresence of Chemistry is apparent in our everyday lives from the electronic devices that we all use to communicate, to foods we eat, to our health and well-being, to the different forms of energy that we use. While there are many subtopics and specialties of Chemistry, the fundamental link in all these areas is how atoms, ions, and molecules come together and come apart in what some have come to call the “dance of life”. All specialty sections of Frontiers in Chemistry are open-access with the goal of publishing outstanding research publications, review articles, commentaries, and ideas about various aspects of Chemistry. The past forms of publication often have specific subdisciplines, most commonly of analytical, inorganic, organic and physical chemistries, but these days those lines and boxes are quite blurry and the silos of those disciplines appear to be eroding. Chemistry is important to both fundamental and applied areas of research and manufacturing, and indeed the outlines of academic versus industrial research are also often artificial. Collaborative research across all specialty areas of Chemistry is highly encouraged and supported as we move forward. These are exciting times and the field of Chemistry is an important and significant contributor to our collective knowledge.
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