Decoding wheat contamination through self-assembled whole-cell biosensor combined with linear and non-linear machine learning algorithms.

IF 10.7 1区 生物学 Q1 BIOPHYSICS
Biosensors and Bioelectronics Pub Date : 2025-01-01 Epub Date: 2024-10-21 DOI:10.1016/j.bios.2024.116869
Qianqian Li, Shengfan Chen, Huawei Wang, Qiaoying Chang, Yi Li, Jianxun Li
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Abstract

The contamination of mycotoxins is a serious problem around the world. It has detrimental effects on human beings and leads to tremendous economic loss. It is essential to develop a rapid and non-destructive method for contamination recognition particularly for early alarm. In this study, the whole-cell biosensor array was constructed and employed for rapid recognition of wheat contamination by combining with machine learning algorithms. Seven key VOCs were explored through univariate coupling to multivariate analysis of orthogonal partial least squares-discrimination analysis (OPLS-DA) models. The promoters of dnaK, katG, oxyR, soxS obtained from the stress-responsive of key VOCs were fused to the bacterial operon and fabricated on the whole-cell biosensor. The constructed whole-cell biosensor array was consisted with four kinds of sensors and 18 sensor unit. The bioluminescent intensity combined with linear machine learning algorithm of partial least squares discriminant analysis (PLS-DA) and non-linear algorithms of back propagating artificial neural network (BP-ANN) and least square support vector machine (LS-SVM) were employed to establish discrimination models for mold contamination especially for early warning. The Monte-Carlo strategy was performed to generate thirty subsets for modeling to give more reliable results. As a result, the whole-cell biosensor combined with non-linear algorithm of LS-SVM was practicable for detecting mold identification for wheat early-warning with the accuracy of 97.24%. Additionally, this study provides practical and effective methods not only for wheat quality guarantee and supervision but also for other foodstuffs.

通过结合线性和非线性机器学习算法的自组装全细胞生物传感器解码小麦污染。
霉菌毒素污染是全世界面临的一个严重问题。它对人类造成有害影响,并导致巨大的经济损失。因此,开发一种快速、非破坏性的污染识别方法,尤其是早期报警方法至关重要。本研究构建了全细胞生物传感器阵列,并将其与机器学习算法相结合,用于快速识别小麦污染。通过正交偏最小二乘判别分析(OPLS-DA)模型的单变量耦合多变量分析,探索了七种关键挥发性有机化合物。从关键挥发性有机化合物的胁迫响应中获得的 dnaK、katG、oxyR、soxS 的启动子被融合到细菌操作子中,并被制作成全细胞生物传感器。构建的全细胞生物传感器阵列由 4 种传感器和 18 个传感器单元组成。生物发光强度结合部分最小二乘判别分析(PLS-DA)的线性机器学习算法以及反向传播人工神经网络(BP-ANN)和最小二乘支持向量机(LS-SVM)的非线性算法,建立了霉菌污染的判别模型,特别是用于早期预警。为了得到更可靠的结果,研究人员采用蒙特卡洛(Monte-Carlo)策略生成了 30 个建模子集。结果表明,全细胞生物传感器与 LS-SVM 非线性算法相结合,可用于小麦早期预警的霉菌识别检测,准确率高达 97.24%。此外,这项研究不仅为小麦质量保证和监督,也为其他食品提供了实用有效的方法。
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来源期刊
Biosensors and Bioelectronics
Biosensors and Bioelectronics 工程技术-电化学
CiteScore
20.80
自引率
7.10%
发文量
1006
审稿时长
29 days
期刊介绍: Biosensors & Bioelectronics, along with its open access companion journal Biosensors & Bioelectronics: X, is the leading international publication in the field of biosensors and bioelectronics. It covers research, design, development, and application of biosensors, which are analytical devices incorporating biological materials with physicochemical transducers. These devices, including sensors, DNA chips, electronic noses, and lab-on-a-chip, produce digital signals proportional to specific analytes. Examples include immunosensors and enzyme-based biosensors, applied in various fields such as medicine, environmental monitoring, and food industry. The journal also focuses on molecular and supramolecular structures for enhancing device performance.
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