Molecular mechanism of Dang-Shen-Yu-Xing decoction against Mycoplasma bovis pneumonia based on network pharmacology, molecular docking, molecular dynamics simulations and experimental verification.

IF 2.6 2区 农林科学 Q1 VETERINARY SCIENCES
Frontiers in Veterinary Science Pub Date : 2024-09-24 eCollection Date: 2024-01-01 DOI:10.3389/fvets.2024.1431233
Mengmeng Yang, Fei Yang, Yanan Guo, Fan Liu, Yong Li, Yanrong Qi, Lei Guo, Shenghu He
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引用次数: 0

Abstract

Mycoplasma bovis pneumonia is a highly contagious respiratory infection caused by Mycoplasma bovis. It is particularly prevalent in calves, posing a significant threat to animal health and leading to substantial economic losses. Dang-Shen-Yu-Xing decoction is often used to treat this condition in veterinary clinics. It exhibits robust anti-inflammatory effects and can alleviate pulmonary fibrosis. However, its mechanism of action remains unclear. Therefore, this study aimed to preliminarily explore the molecular mechanism of Dang-Shen-Yu-Xing decoction for treating mycoplasma pneumonia in calves through a combination of network pharmacology, molecular docking, molecular dynamics simulation methods, and experimental validation. The active components and related targets of Dang-Shen-Yu-Xing decoction were extracted from several public databases. Additionally, complex interactions between drugs and targets were explored through network topology, Gene Ontology, and Kyoto Encyclopedia of Genes and Genomes enrichment analyses. Subsequently, the binding affinity of drug to disease-related targets was verified through molecular docking and molecular dynamics simulation. Finally, the pharmacodynamics were verified via animal experiments. The primary network topology analysis revealed two core targets and 10 key active components of Dang-Shen-Yu-Xing decoction against Mycoplasma bovis pneumonia. Kyoto Encyclopedia of Genes and Genomes enrichment analysis showed that the mechanism of Dang-Shen-Yu-Xing decoction for treating mycoplasma bovis pneumonia involved multiple signaling pathways, with the main pathways including PI3K-Akt and IL17 signaling pathways. Moreover, molecular docking predicted the binding affinity and conformation of the core targets of Dang-Shen-Yu-Xing decoction, IL6, and IL10, with the associated main active ingredients. The results showed a strong binding of the active ingredients to the hub target. Further, molecular docking dynamics simulation revealed three key active components of IL10 induced by Dang-Shen-Yu-Xing decoction against Mycoplasma bovis pneumonia. Finally, animal experiments confirmed Dang-Shen-Yu-Xing decoction pharmacodynamics, suggesting that it holds potential as an alternative therapy for treating mycoplasma bovis pneumonia.

基于网络药理学、分子对接、分子动力学模拟和实验验证的党参玉星煎膏抗支原体肺炎的分子机制
牛支原体肺炎是由牛支原体引起的一种传染性极强的呼吸道传染病。它在犊牛中尤为流行,对动物健康构成严重威胁,并导致巨大的经济损失。兽医诊所常用党参玉星煎剂来治疗这种疾病。它具有很强的抗炎作用,可以缓解肺纤维化。然而,其作用机制仍不清楚。因此,本研究旨在通过结合网络药理学、分子对接、分子动力学模拟方法和实验验证,初步探讨党参玉星汤治疗犊牛支原体肺炎的分子机制。研究人员从多个公共数据库中提取了党参玉星汤的活性成分和相关靶点。此外,还通过网络拓扑、基因本体和京都基因与基因组百科全书的富集分析,探讨了药物与靶点之间复杂的相互作用。随后,通过分子对接和分子动力学模拟验证了药物与疾病相关靶点的结合亲和力。最后,通过动物实验验证了药效学。通过一级网络拓扑分析,发现了党参玉星煎膏对支原体肺炎的两个核心靶点和10个关键活性成分。京都基因组百科全书》富集分析表明,党参毓兴煎膏治疗支原体肺炎的机制涉及多个信号通路,其中主要通路包括PI3K-Akt和IL17信号通路。此外,分子对接还预测了党参玉星汤的核心靶点IL6和IL10与相关主要活性成分的结合亲和力和构象。结果表明,有效成分与枢纽靶点的结合力很强。此外,分子对接动力学模拟揭示了党参玉星煎剂诱导的 IL10 对抗支原体肺炎的三种关键活性成分。最后,动物实验证实了党参玉星煎膏的药效学,表明它有潜力成为治疗支原体肺炎的替代疗法。
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来源期刊
Frontiers in Veterinary Science
Frontiers in Veterinary Science Veterinary-General Veterinary
CiteScore
4.80
自引率
9.40%
发文量
1870
审稿时长
14 weeks
期刊介绍: Frontiers in Veterinary Science is a global, peer-reviewed, Open Access journal that bridges animal and human health, brings a comparative approach to medical and surgical challenges, and advances innovative biotechnology and therapy. Veterinary research today is interdisciplinary, collaborative, and socially relevant, transforming how we understand and investigate animal health and disease. Fundamental research in emerging infectious diseases, predictive genomics, stem cell therapy, and translational modelling is grounded within the integrative social context of public and environmental health, wildlife conservation, novel biomarkers, societal well-being, and cutting-edge clinical practice and specialization. Frontiers in Veterinary Science brings a 21st-century approach—networked, collaborative, and Open Access—to communicate this progress and innovation to both the specialist and to the wider audience of readers in the field. Frontiers in Veterinary Science publishes articles on outstanding discoveries across a wide spectrum of translational, foundational, and clinical research. The journal''s mission is to bring all relevant veterinary sciences together on a single platform with the goal of improving animal and human health.
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